add r-melissa

2 files changed, 78 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..677e5768c18c
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,31 @@
+pkgbase = r-melissa
+	pkgdesc = Bayesian clustering and imputationa of single cell methylomes
+	pkgver = 1.12.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/Melissa
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-assertthat
+	depends = r-biocstyle
+	depends = r-bprmeth
+	depends = r-cowplot
+	depends = r-data.table
+	depends = r-doparallel
+	depends = r-foreach
+	depends = r-genomicranges
+	depends = r-ggplot2
+	depends = r-magrittr
+	depends = r-matrixcalc
+	depends = r-mclust
+	depends = r-mcmcpack
+	depends = r-mvtnorm
+	depends = r-rocr
+	depends = r-truncnorm
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/Melissa_1.12.0.tar.gz
+	sha256sums = 70adcaeb95a290a28871260f50e03b115d09189c81dadb87fecf10e177428ea9
+
+pkgname = r-melissa
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..cae2803fa35e
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,47 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=Melissa
+_pkgver=1.12.0
+pkgname=r-${_pkgname,,}
+pkgver=1.12.0
+pkgrel=1
+pkgdesc='Bayesian clustering and imputationa of single cell methylomes'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-assertthat
+  r-biocstyle
+  r-bprmeth
+  r-cowplot
+  r-data.table
+  r-doparallel
+  r-foreach
+  r-genomicranges
+  r-ggplot2
+  r-magrittr
+  r-matrixcalc
+  r-mclust
+  r-mcmcpack
+  r-mvtnorm
+  r-rocr
+  r-truncnorm
+)
+optdepends=(
+  r-knitr
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('70adcaeb95a290a28871260f50e03b115d09189c81dadb87fecf10e177428ea9')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: