add r-mirbaseconverter

2 files changed, 52 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..830f9ab4038d
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,18 @@
+pkgbase = r-mirbaseconverter
+	pkgdesc = A comprehensive and high-efficiency tool for converting and retrieving the information of miRNAs in different miRBase versions
+	pkgver = 1.20.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/miRBaseConverter
+	arch = any
+	license = GPL
+	depends = r
+	optdepends = r-biocgenerics
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-rtracklayer
+	optdepends = r-runit
+	optdepends = r-utils
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/miRBaseConverter_1.20.0.tar.gz
+	sha256sums = a7e05e84929947365daf3593736554d21d0939dc650bde16a60aab5a9293597c
+
+pkgname = r-mirbaseconverter
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..1a6339938501
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,34 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=miRBaseConverter
+_pkgver=1.20.0
+pkgname=r-${_pkgname,,}
+pkgver=1.20.0
+pkgrel=1
+pkgdesc='A comprehensive and high-efficiency tool for converting and retrieving the information of miRNAs in different miRBase versions'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+)
+optdepends=(
+  r-biocgenerics
+  r-knitr
+  r-rmarkdown
+  r-rtracklayer
+  r-runit
+  r-utils
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a7e05e84929947365daf3593736554d21d0939dc650bde16a60aab5a9293597c')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: