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authorBioArchLinuxBot2024-02-11 18:07:02 +0000
committerBioArchLinuxBot2024-02-11 18:07:02 +0000
commitf223d5254ad36d4bcbe94760d203d7ba5a2ab8f5 (patch)
treefd8a81e1dbd4b9836a4fd6335522453102528529
parent606dd327e5fa43c7f8c2a52b56c1c04d19848ca4 (diff)
downloadaur-f223d5254ad36d4bcbe94760d203d7ba5a2ab8f5.tar.gz
[lilac] updated to 1.22.0-2
-rw-r--r--.SRCINFO10
-rw-r--r--PKGBUILD26
2 files changed, 18 insertions, 18 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 598ead54fa2d..8cdc2eb1bc25 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,17 +1,17 @@
pkgbase = r-mirmine
pkgdesc = Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment
pkgver = 1.22.0
- pkgrel = 1
+ pkgrel = 2
url = https://bioconductor.org/packages/miRmine
arch = any
- license = GPL
- depends = r
+ license = GPL-3.0-or-later
depends = r-summarizedexperiment
optdepends = r-biocstyle
optdepends = r-deseq2
optdepends = r-knitr
optdepends = r-rmarkdown
- source = https://bioconductor.org/packages/release/bioc/src/contrib/miRmine_1.22.0.tar.gz
- sha256sums = 8ffaaac5cfc1400214cfe9ad80531c37b272aa973a57ca3f163bdeade88816b4
+ source = https://bioconductor.org/packages/3.17/bioc/src/contrib/miRmine_1.22.0.tar.gz
+ md5sums = 4f2bfc5c74548b15515c808c2994a5f9
+ b2sums = 329ec39e901e026dcd62dc7e231350fde75c6718fe7b4bdd4407e1a7ab7836558364fdbecbaeb9ea90d7588da086219217f70f5f843c75a0799cbe7384b52c2d
pkgname = r-mirmine
diff --git a/PKGBUILD b/PKGBUILD
index 1a01587f5105..9ea026b488ae 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,14 +3,13 @@
_pkgname=miRmine
_pkgver=1.22.0
pkgname=r-${_pkgname,,}
-pkgver=1.22.0
-pkgrel=1
-pkgdesc='Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment'
-arch=('any')
-url="https://bioconductor.org/packages/${_pkgname}"
-license=('GPL')
+pkgver=${_pkgver//-/.}
+pkgrel=2
+pkgdesc="Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment"
+arch=(any)
+url="https://bioconductor.org/packages/$_pkgname"
+license=('GPL-3.0-or-later')
depends=(
- r
r-summarizedexperiment
)
optdepends=(
@@ -19,15 +18,16 @@ optdepends=(
r-knitr
r-rmarkdown
)
-source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('8ffaaac5cfc1400214cfe9ad80531c37b272aa973a57ca3f163bdeade88816b4')
+source=("https://bioconductor.org/packages/3.17/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('4f2bfc5c74548b15515c808c2994a5f9')
+b2sums=('329ec39e901e026dcd62dc7e231350fde75c6718fe7b4bdd4407e1a7ab7836558364fdbecbaeb9ea90d7588da086219217f70f5f843c75a0799cbe7384b52c2d')
build() {
- R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
}
package() {
- install -dm0755 "${pkgdir}/usr/lib/R/library"
- cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
-# vim:set ts=2 sw=2 et: