add r-mmuphin

2 files changed, 75 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..cd1ea40a729b
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,29 @@
+pkgbase = r-mmuphin
+	pkgdesc = Meta-analysis Methods with Uniform Pipeline for Heterogeneity in Microbiome Studies
+	pkgver = 1.10.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/MMUPHin
+	arch = any
+	license = MIT
+	depends = r
+	depends = r-cowplot
+	depends = r-dplyr
+	depends = r-fpc
+	depends = r-ggplot2
+	depends = r-igraph
+	depends = r-maaslin2
+	depends = r-metafor
+	depends = r-tidyr
+	optdepends = r-biocstyle
+	optdepends = r-curatedmetagenomicdata
+	optdepends = r-genefilter
+	optdepends = r-knitr
+	optdepends = r-magrittr
+	optdepends = r-phyloseq
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	optdepends = r-vegan
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/MMUPHin_1.10.0.tar.gz
+	sha256sums = 814853cbdf68c76fc5f4148e99eb8b1ba4f3770e2d926be174c48a7097a559d2
+
+pkgname = r-mmuphin
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..f83e9100027d
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,46 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=MMUPHin
+_pkgver=1.10.0
+pkgname=r-${_pkgname,,}
+pkgver=1.10.0
+pkgrel=1
+pkgdesc='Meta-analysis Methods with Uniform Pipeline for Heterogeneity in Microbiome Studies'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('MIT')
+depends=(
+  r
+  r-cowplot
+  r-dplyr
+  r-fpc
+  r-ggplot2
+  r-igraph
+  r-maaslin2
+  r-metafor
+  r-tidyr
+)
+optdepends=(
+  r-biocstyle
+  r-curatedmetagenomicdata
+  r-genefilter
+  r-knitr
+  r-magrittr
+  r-phyloseq
+  r-rmarkdown
+  r-testthat
+  r-vegan
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('814853cbdf68c76fc5f4148e99eb8b1ba4f3770e2d926be174c48a7097a559d2')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+  install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+}
+# vim:set ts=2 sw=2 et: