diff options
| author | Sukanka | 2022-06-06 16:07:58 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 16:07:58 +0800 |
| commit | 065c52f06e926f31a7d837cd6523df8f9e2e319f (patch) | |
| tree | 96b4b191826215ca42365d161852e9f5d71340a7 | |
| download | aur-065c52f06e926f31a7d837cd6523df8f9e2e319f.tar.gz | |
add r-monalisa
| -rw-r--r-- | .SRCINFO | 36 | ||||
| -rw-r--r-- | PKGBUILD | 52 |
2 files changed, 88 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..9c80ee17fa25 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,36 @@ +pkgbase = r-monalisa + pkgdesc = Binned Motif Enrichment Analysis and Visualization + pkgver = 1.2.0 + pkgrel = 1 + url = https://bioconductor.org/packages/monaLisa + arch = any + license = GPL + depends = r + depends = r-biocgenerics + depends = r-biocparallel + depends = r-biostrings + depends = r-bsgenome + depends = r-circlize + depends = r-complexheatmap + depends = r-genomeinfodb + depends = r-genomicranges + depends = r-glmnet + depends = r-iranges + depends = r-s4vectors + depends = r-stabs + depends = r-summarizedexperiment + depends = r-tfbstools + depends = r-vioplot + depends = r-xvector + optdepends = r-biocstyle + optdepends = r-bsgenome.mmusculus.ucsc.mm10 + optdepends = r-gridextra + optdepends = r-jaspar2020 + optdepends = r-knitr + optdepends = r-rmarkdown + optdepends = r-testthat + optdepends = r-txdb.mmusculus.ucsc.mm10.knowngene + source = https://bioconductor.org/packages/release/bioc/src/contrib/monaLisa_1.2.0.tar.gz + sha256sums = a657bc0af5f5ab6c72b760f43a1967e827d2514b85d97f508be733527c9e1867 + +pkgname = r-monalisa diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..30d7ec24432a --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,52 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=monaLisa +_pkgver=1.2.0 +pkgname=r-${_pkgname,,} +pkgver=1.2.0 +pkgrel=1 +pkgdesc='Binned Motif Enrichment Analysis and Visualization' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biocgenerics + r-biocparallel + r-biostrings + r-bsgenome + r-circlize + r-complexheatmap + r-genomeinfodb + r-genomicranges + r-glmnet + r-iranges + r-s4vectors + r-stabs + r-summarizedexperiment + r-tfbstools + r-vioplot + r-xvector +) +optdepends=( + r-biocstyle + r-bsgenome.mmusculus.ucsc.mm10 + r-gridextra + r-jaspar2020 + r-knitr + r-rmarkdown + r-testthat + r-txdb.mmusculus.ucsc.mm10.knowngene +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('a657bc0af5f5ab6c72b760f43a1967e827d2514b85d97f508be733527c9e1867') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |