Version 1.6.0

2 files changed, 69 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..d1376759739f
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,23 @@
+pkgbase = r-msbackendmsp
+	pkgdesc = Mass Spectrometry Data Backend for NIST msp Files
+	pkgver = 1.6.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/MsBackendMsp
+	arch = any
+	license = Artistic2.0
+	checkdepends = r-testthat
+	depends = r-biocparallel
+	depends = r-iranges
+	depends = r-mscoreutils
+	depends = r-s4vectors
+	depends = r-spectra
+	optdepends = r-biocstyle
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-roxygen2
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/MsBackendMsp_1.6.0.tar.gz
+	md5sums = 805d831547106b2f232bb9eda75172bc
+	sha256sums = 9e748bd8066416c0c2b9f8ba39cd3253ce755c0e45f6af6ae5eb095b9fa666fc
+
+pkgname = r-msbackendmsp
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..3abcb10fe85f
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,46 @@
+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+
+_pkgname=MsBackendMsp
+_pkgver=1.6.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="Mass Spectrometry Data Backend for NIST msp Files"
+arch=(any)
+url="https://bioconductor.org/packages/${_pkgname}"
+license=(Artistic2.0)
+depends=(
+  r-biocparallel
+  r-iranges
+  r-mscoreutils
+  r-s4vectors
+  r-spectra
+)
+checkdepends=(
+  r-testthat
+)
+optdepends=(
+  r-biocstyle
+  r-knitr
+  r-rmarkdown
+  r-roxygen2
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('805d831547106b2f232bb9eda75172bc')
+sha256sums=('9e748bd8066416c0c2b9f8ba39cd3253ce755c0e45f6af6ae5eb095b9fa666fc')
+
+build() {
+  mkdir -p build
+  R CMD INSTALL "$_pkgname" -l build
+}
+
+check() {
+  cd "$_pkgname/tests"
+  R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
+}
+
+package() {
+  install -d "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+}