Version 1.2.0

2 files changed, 71 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..2fb1dad80751
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,24 @@
+pkgbase = r-msdatahub
+	pkgdesc = Mass Spectrometry Data on ExperimentHub
+	pkgver = 1.2.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/MsDataHub
+	arch = any
+	license = Artistic2.0
+	checkdepends = r-testthat
+	depends = r-experimenthub
+	optdepends = r-biocstyle
+	optdepends = r-dt
+	optdepends = r-experimenthubdata
+	optdepends = r-knitr
+	optdepends = r-mzr
+	optdepends = r-psmatch
+	optdepends = r-qfeatures
+	optdepends = r-rmarkdown
+	optdepends = r-spectra
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/MsDataHub_1.2.0.tar.gz
+	md5sums = f355465b6b3994491364cbe994e4488d
+	sha256sums = 991de642121db86be31c55c72ad17ac24999afd66a1ec568636e8ff0d78cd30d
+
+pkgname = r-msdatahub
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..12e625471556
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,47 @@
+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+
+_pkgname=MsDataHub
+_pkgver=1.2.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="Mass Spectrometry Data on ExperimentHub"
+arch=(any)
+url="https://bioconductor.org/packages/${_pkgname}"
+license=(Artistic2.0)
+depends=(
+  r-experimenthub
+)
+checkdepends=(
+  r-testthat
+)
+optdepends=(
+  r-biocstyle
+  r-dt
+  r-experimenthubdata
+  r-knitr
+  r-mzr
+  r-psmatch
+  r-qfeatures
+  r-rmarkdown
+  r-spectra
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('f355465b6b3994491364cbe994e4488d')
+sha256sums=('991de642121db86be31c55c72ad17ac24999afd66a1ec568636e8ff0d78cd30d')
+
+build() {
+  mkdir -p build
+  R CMD INSTALL "$_pkgname" -l build
+}
+
+check() {
+  cd "$_pkgname/tests"
+  R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
+}
+
+package() {
+  install -d "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+}