add r-multicrispr

2 files changed, 102 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..bbd2a85a90f2
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,43 @@
+pkgbase = r-multicrispr
+	pkgdesc = Multi-locus multi-purpose Crispr/Cas design
+	pkgver = 1.6.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/multicrispr
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-assertive
+	depends = r-biocgenerics
+	depends = r-biostrings
+	depends = r-bsgenome
+	depends = r-crisprseek
+	depends = r-data.table
+	depends = r-genomeinfodb
+	depends = r-genomicfeatures
+	depends = r-genomicranges
+	depends = r-ggplot2
+	depends = r-karyoploter
+	depends = r-magrittr
+	depends = r-plyranges
+	depends = r-rbowtie
+	depends = r-reticulate
+	depends = r-rtracklayer
+	depends = r-stringi
+	depends = r-tidyr
+	depends = r-tidyselect
+	optdepends = r-annotationhub
+	optdepends = r-biocstyle
+	optdepends = r-bsgenome.hsapiens.ucsc.hg38
+	optdepends = r-bsgenome.mmusculus.ucsc.mm10
+	optdepends = r-bsgenome.scerevisiae.ucsc.saccer1
+	optdepends = r-ensembldb
+	optdepends = r-iranges
+	optdepends = r-knitr
+	optdepends = r-magick
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	optdepends = r-txdb.mmusculus.ucsc.mm10.knowngene
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/multicrispr_1.6.0.tar.gz
+	sha256sums = 9e699e0ed65fd7fc266cd211ab3591d1fa5f04ddfff106495b5c4dca6b95b46a
+
+pkgname = r-multicrispr
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..f8afcc303e90
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,59 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=multicrispr
+_pkgver=1.6.0
+pkgname=r-${_pkgname,,}
+pkgver=1.6.0
+pkgrel=1
+pkgdesc='Multi-locus multi-purpose Crispr/Cas design'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-assertive
+  r-biocgenerics
+  r-biostrings
+  r-bsgenome
+  r-crisprseek
+  r-data.table
+  r-genomeinfodb
+  r-genomicfeatures
+  r-genomicranges
+  r-ggplot2
+  r-karyoploter
+  r-magrittr
+  r-plyranges
+  r-rbowtie
+  r-reticulate
+  r-rtracklayer
+  r-stringi
+  r-tidyr
+  r-tidyselect
+)
+optdepends=(
+  r-annotationhub
+  r-biocstyle
+  r-bsgenome.hsapiens.ucsc.hg38
+  r-bsgenome.mmusculus.ucsc.mm10
+  r-bsgenome.scerevisiae.ucsc.saccer1
+  r-ensembldb
+  r-iranges
+  r-knitr
+  r-magick
+  r-rmarkdown
+  r-testthat
+  r-txdb.mmusculus.ucsc.mm10.knowngene
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('9e699e0ed65fd7fc266cd211ab3591d1fa5f04ddfff106495b5c4dca6b95b46a')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: