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| author | BioArchLinuxBot | 2024-04-15 18:20:29 +0000 |
|---|---|---|
| committer | BioArchLinuxBot | 2024-04-15 18:20:29 +0000 |
| commit | 1c9a3a43f68cfaeed7e4cf458e9436b5919e01fb (patch) | |
| tree | 3a798b330e58ea154e291544e5a9ccf5cc9ab7ac | |
| parent | 8174278d6214108033c4c474d963922c87a87366 (diff) | |
| download | aur-1c9a3a43f68cfaeed7e4cf458e9436b5919e01fb.tar.gz | |
[lilac] updated to 1.18.0-2
| -rw-r--r-- | .SRCINFO | 8 | ||||
| -rw-r--r-- | PKGBUILD | 28 |
2 files changed, 19 insertions, 17 deletions
@@ -1,11 +1,10 @@ pkgbase = r-nanotator pkgdesc = Next generation structural variant annotation and classification pkgver = 1.18.0 - pkgrel = 1 + pkgrel = 2 url = https://bioconductor.org/packages/nanotatoR arch = any - license = custom - depends = r + license = LicenseRef-nanotatoR depends = r-annotationdbi depends = r-curl depends = r-dplyr @@ -26,6 +25,7 @@ pkgbase = r-nanotator optdepends = r-rmarkdown optdepends = r-yaml source = https://bioconductor.org/packages/release/bioc/src/contrib/nanotatoR_1.18.0.tar.gz - sha256sums = eb8200b0f4818ad032af934179ba779b1b9869d7a2e42b44bad5ccb3c823d0da + md5sums = e808c68591d98effbfdba4dbac07ac91 + b2sums = 337e99575b94adc4658f8fa14e8358460f591effd1f723dc22f3f22492afd3aa7cb4e04d3e9a875db9208bdb1ca146082808fca0fadc5a154475f4c0582f75dd pkgname = r-nanotator @@ -3,14 +3,13 @@ _pkgname=nanotatoR _pkgver=1.18.0 pkgname=r-${_pkgname,,} -pkgver=1.18.0 -pkgrel=1 -pkgdesc='Next generation structural variant annotation and classification' -arch=('any') -url="https://bioconductor.org/packages/${_pkgname}" -license=('custom') +pkgver=${_pkgver//-/.} +pkgrel=2 +pkgdesc="Next generation structural variant annotation and classification" +arch=(any) +url="https://bioconductor.org/packages/$_pkgname" +license=('LicenseRef-nanotatoR') depends=( - r r-annotationdbi r-curl r-dplyr @@ -34,15 +33,18 @@ optdepends=( r-yaml ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('eb8200b0f4818ad032af934179ba779b1b9869d7a2e42b44bad5ccb3c823d0da') +md5sums=('e808c68591d98effbfdba4dbac07ac91') +b2sums=('337e99575b94adc4658f8fa14e8358460f591effd1f723dc22f3f22492afd3aa7cb4e04d3e9a875db9208bdb1ca146082808fca0fadc5a154475f4c0582f75dd') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir build + R CMD INSTALL -l build "$_pkgname" } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" - install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" + + install -d "$pkgdir/usr/share/licenses/$pkgname" + ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname" } -# vim:set ts=2 sw=2 et: |