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author | BioArchLinuxBot | 2024-05-11 12:05:32 +0000 |
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committer | BioArchLinuxBot | 2024-05-11 12:05:32 +0000 |
commit | 61955fe189e249ee4393f0722d92f369a47092cd (patch) | |
tree | ea3a7bbd32a3ad917eaef6ca4b565b40cd6e1a39 | |
parent | 1c0bae6e808eabe94d695520cd7cba26be5506fd (diff) | |
download | aur-61955fe189e249ee4393f0722d92f369a47092cd.tar.gz |
[lilac] updated to 2.6.0-1
-rw-r--r-- | .SRCINFO | 16 | ||||
-rw-r--r-- | PKGBUILD | 31 |
2 files changed, 23 insertions, 24 deletions
@@ -1,26 +1,22 @@ pkgbase = r-ngsreports pkgdesc = Load FastqQC reports and other NGS related files - pkgver = 2.4.0 + pkgver = 2.6.0 pkgrel = 1 url = https://bioconductor.org/packages/ngsReports arch = any - license = custom - depends = r + license = LGPL-3.0-only depends = r-biocgenerics depends = r-biostrings depends = r-checkmate depends = r-dplyr - depends = r-dt depends = r-forcats depends = r-ggdendro depends = r-ggplot2 depends = r-jsonlite depends = r-lifecycle depends = r-lubridate - depends = r-pander depends = r-patchwork depends = r-plotly - depends = r-readr depends = r-reshape2 depends = r-rlang depends = r-rmarkdown @@ -32,10 +28,14 @@ pkgbase = r-ngsreports depends = r-zoo optdepends = r-biocstyle optdepends = r-cairo + optdepends = r-dt optdepends = r-knitr + optdepends = r-pander + optdepends = r-readr optdepends = r-testthat optdepends = r-truncnorm - source = https://bioconductor.org/packages/release/bioc/src/contrib/ngsReports_2.4.0.tar.gz - sha256sums = abc115a8dd01244ce57952cfbee1d09b675d40c8141d53c4fc33b4adb1a9145e + source = https://bioconductor.org/packages/release/bioc/src/contrib/ngsReports_2.6.0.tar.gz + md5sums = c080f808fd3a26fe71440f9c2051bab2 + b2sums = 09daa5fa3d5cba8fae8cdabde776ae88bc9cd803a20fdae49a8c1fb0a1a946adcbeb954c39ee12541aafcb87eb887b522316fedf6f217963bf7d4065aa7871d4 pkgname = r-ngsreports @@ -1,31 +1,27 @@ # Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=ngsReports -_pkgver=2.4.0 +_pkgver=2.6.0 pkgname=r-${_pkgname,,} -pkgver=2.4.0 +pkgver=${_pkgver//-/.} pkgrel=1 -pkgdesc='Load FastqQC reports and other NGS related files' -arch=('any') -url="https://bioconductor.org/packages/${_pkgname}" -license=('custom') +pkgdesc="Load FastqQC reports and other NGS related files" +arch=(any) +url="https://bioconductor.org/packages/$_pkgname" +license=('LGPL-3.0-only') depends=( - r r-biocgenerics r-biostrings r-checkmate r-dplyr - r-dt r-forcats r-ggdendro r-ggplot2 r-jsonlite r-lifecycle r-lubridate - r-pander r-patchwork r-plotly - r-readr r-reshape2 r-rlang r-rmarkdown @@ -39,20 +35,23 @@ depends=( optdepends=( r-biocstyle r-cairo + r-dt r-knitr + r-pander + r-readr r-testthat r-truncnorm ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('abc115a8dd01244ce57952cfbee1d09b675d40c8141d53c4fc33b4adb1a9145e') +md5sums=('c080f808fd3a26fe71440f9c2051bab2') +b2sums=('09daa5fa3d5cba8fae8cdabde776ae88bc9cd803a20fdae49a8c1fb0a1a946adcbeb954c39ee12541aafcb87eb887b522316fedf6f217963bf7d4065aa7871d4') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir build + R CMD INSTALL -l build "$_pkgname" } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" - install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: |