Version 1.4.0

2 files changed, 85 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..c7a6c93df3b0
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,31 @@
+pkgbase = r-panviz
+	pkgdesc = Integrating Multi-Omic Network Data With Summay-Level GWAS Data
+	pkgver = 1.4.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/PanViz
+	arch = any
+	license = Artistic2.0
+	checkdepends = r-testthat
+	depends = r-colorspace
+	depends = r-data.table
+	depends = r-dplyr
+	depends = r-easycsv
+	depends = r-futile.logger
+	depends = r-igraph
+	depends = r-magrittr
+	depends = r-rcolorbrewer
+	depends = r-rentrez
+	depends = r-rlang
+	depends = r-stringr
+	depends = r-tibble
+	depends = r-tidyr
+	optdepends = r-biocstyle
+	optdepends = r-knitr
+	optdepends = r-networkd3
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/PanViz_1.4.0.tar.gz
+	md5sums = 5d5ced4ee7d68f57367aed30633f29e0
+	sha256sums = a05161ea6299e1426430c604c4e6ce050aa4b528b8d32c32f5fe43d8522b52a5
+
+pkgname = r-panviz
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..6a9270b3233e
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,54 @@
+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+
+_pkgname=PanViz
+_pkgver=1.4.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="Integrating Multi-Omic Network Data With Summay-Level GWAS Data"
+arch=(any)
+url="https://bioconductor.org/packages/${_pkgname}"
+license=(Artistic2.0)
+depends=(
+  r-colorspace
+  r-data.table
+  r-dplyr
+  r-easycsv
+  r-futile.logger
+  r-igraph
+  r-magrittr
+  r-rcolorbrewer
+  r-rentrez
+  r-rlang
+  r-stringr
+  r-tibble
+  r-tidyr
+)
+checkdepends=(
+  r-testthat
+)
+optdepends=(
+  r-biocstyle
+  r-knitr
+  r-networkd3
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('5d5ced4ee7d68f57367aed30633f29e0')
+sha256sums=('a05161ea6299e1426430c604c4e6ce050aa4b528b8d32c32f5fe43d8522b52a5')
+
+build() {
+  mkdir -p build
+  R CMD INSTALL "$_pkgname" -l build
+}
+
+check() {
+  cd "$_pkgname/tests"
+  R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
+}
+
+package() {
+  install -d "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+}