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authorBioArchLinuxBot2024-03-14 18:09:53 +0000
committerBioArchLinuxBot2024-03-14 18:09:53 +0000
commit99dd0723cf99a1270891c3807e5236c2618a6d95 (patch)
tree576a84f5d1f82f95f0dead939529be0b0c278ef9
parent8ba452cd7efb3a3d314b169ce8fc62e3f64b35c5 (diff)
downloadaur-99dd0723cf99a1270891c3807e5236c2618a6d95.tar.gz
[lilac] updated to 2.24.0-2
-rw-r--r--.SRCINFO5
-rw-r--r--PKGBUILD25
2 files changed, 17 insertions, 13 deletions
diff --git a/.SRCINFO b/.SRCINFO
index f609bd05d9fa..1616cac53f7d 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,13 +1,14 @@
pkgbase = r-pcxndata
pkgdesc = Correlation coefficients and p values between pre-defined pathway/gene sets
pkgver = 2.24.0
- pkgrel = 1
+ pkgrel = 2
url = https://bioconductor.org/packages/pcxnData
arch = any
license = MIT
depends = r
optdepends = r-pcxn
source = https://bioconductor.org/packages/release/data/experiment/src/contrib/pcxnData_2.24.0.tar.gz
- sha256sums = 124c63d4ed955a4d161351041adf5a4e9e8f23db78c04494159d5982627c1856
+ md5sums = 7814b1a6f5dbd08e71df1e92ea4328f6
+ b2sums = 72416295922d60f8932329bb0aa7c2cdbafcf4e55b7483f53245bae94cd7a3859d3932dad9fd4509169779707e52dd34a8ac44261f81704bfe29e82937aa0b0a
pkgname = r-pcxndata
diff --git a/PKGBUILD b/PKGBUILD
index 15a3c358aae0..2e8ecefac417 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,11 +3,11 @@
_pkgname=pcxnData
_pkgver=2.24.0
pkgname=r-${_pkgname,,}
-pkgver=2.24.0
-pkgrel=1
-pkgdesc='Correlation coefficients and p values between pre-defined pathway/gene sets'
-arch=('any')
-url="https://bioconductor.org/packages/${_pkgname}"
+pkgver=${_pkgver//-/.}
+pkgrel=2
+pkgdesc="Correlation coefficients and p values between pre-defined pathway/gene sets"
+arch=(any)
+url="https://bioconductor.org/packages/$_pkgname"
license=('MIT')
depends=(
r
@@ -16,15 +16,18 @@ optdepends=(
r-pcxn
)
source=("https://bioconductor.org/packages/release/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('124c63d4ed955a4d161351041adf5a4e9e8f23db78c04494159d5982627c1856')
+md5sums=('7814b1a6f5dbd08e71df1e92ea4328f6')
+b2sums=('72416295922d60f8932329bb0aa7c2cdbafcf4e55b7483f53245bae94cd7a3859d3932dad9fd4509169779707e52dd34a8ac44261f81704bfe29e82937aa0b0a')
build() {
- R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
}
package() {
- install -dm0755 "${pkgdir}/usr/lib/R/library"
- cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
- install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+
+ install -d "$pkgdir/usr/share/licenses/$pkgname"
+ ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
-# vim:set ts=2 sw=2 et: