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authorSukanka2022-06-06 18:15:23 +0800
committerSukanka2022-06-06 18:15:23 +0800
commite0b6a2c4f94e97218cfa4d93e3fb62399ee864f3 (patch)
treefdbe0c0fbcd3334b01e9b9852b964783bc3301f0
downloadaur-e0b6a2c4f94e97218cfa4d93e3fb62399ee864f3.tar.gz
add r-pepxmltab
-rw-r--r--.SRCINFO15
-rw-r--r--PKGBUILD31
2 files changed, 46 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..bed1afc6eee8
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,15 @@
+pkgbase = r-pepxmltab
+ pkgdesc = Parsing pepXML files and filter based on peptide FDR.
+ pkgver = 1.30.0
+ pkgrel = 1
+ url = https://bioconductor.org/packages/pepXMLTab
+ arch = any
+ license = Artistic2.0
+ depends = r
+ depends = r-xml
+ optdepends = r-biocgenerics
+ optdepends = r-runit
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/pepXMLTab_1.30.0.tar.gz
+ sha256sums = 9a6fed110e68a018f40a0ba66de7ee556cd60d4129b29a004d9edbc5caa8d685
+
+pkgname = r-pepxmltab
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..90a0fcafcf7d
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,31 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=pepXMLTab
+_pkgver=1.30.0
+pkgname=r-${_pkgname,,}
+pkgver=1.30.0
+pkgrel=1
+pkgdesc='Parsing pepXML files and filter based on peptide FDR.'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+ r
+ r-xml
+)
+optdepends=(
+ r-biocgenerics
+ r-runit
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('9a6fed110e68a018f40a0ba66de7ee556cd60d4129b29a004d9edbc5caa8d685')
+
+build() {
+ R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+ install -dm0755 "${pkgdir}/usr/lib/R/library"
+ cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: