add r-perfect

2 files changed, 60 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..6c46f4f9ce04
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,22 @@
+pkgbase = r-perfect
+	pkgdesc = Permutation filtration for microbiome data
+	pkgver = 1.10.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/PERFect
+	arch = any
+	license = Artistic2.0
+	depends = r
+	depends = r-fitdistrplus
+	depends = r-ggplot2
+	depends = r-phyloseq
+	depends = r-psych
+	depends = r-sn
+	depends = r-zoo
+	optdepends = r-ggpubr
+	optdepends = r-kableextra
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/PERFect_1.10.0.tar.gz
+	sha256sums = 462919106e9c5022727310f4104f6b75a7694e6c82cff81b7afbe6b5c6dccb0c
+
+pkgname = r-perfect
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..6e49d0a75a98
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,38 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=PERFect
+_pkgver=1.10.0
+pkgname=r-${_pkgname,,}
+pkgver=1.10.0
+pkgrel=1
+pkgdesc='Permutation filtration for microbiome data'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-fitdistrplus
+  r-ggplot2
+  r-phyloseq
+  r-psych
+  r-sn
+  r-zoo
+)
+optdepends=(
+  r-ggpubr
+  r-kableextra
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('462919106e9c5022727310f4104f6b75a7694e6c82cff81b7afbe6b5c6dccb0c')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: