diff options
| author | Sukanka | 2022-06-06 18:20:58 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 18:20:58 +0800 |
| commit | 399bcd2839aebbb5d55db9027543a0f35edbd004 (patch) | |
| tree | d644de6d9c66f245fdc83ac5210648604c4eeddf | |
| download | aur-r-phastcons100way.ucsc.hg38.tar.gz | |
add r-phastcons100way.ucsc.hg38
| -rw-r--r-- | .SRCINFO | 18 | ||||
| -rw-r--r-- | PKGBUILD | 32 |
2 files changed, 50 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..03cdf04fc478 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,18 @@ +pkgbase = r-phastcons100way.ucsc.hg38 + pkgdesc = UCSC phastCons conservation scores for hg38 + pkgver = 3.7.1 + pkgrel = 3 + url = https://bioconductor.org/packages/phastCons100way.UCSC.hg38 + arch = any + license = Artistic2.0 + depends = r + depends = r-bsgenome + depends = r-genomeinfodb + depends = r-genomicranges + depends = r-genomicscores + depends = r-iranges + depends = r-s4vectors + source = https://bioconductor.org/packages/release/data/annotation/src/contrib/phastCons100way.UCSC.hg38_3.7.1.tar.gz + sha256sums = 607ba9035ef1ce21768e4471efe6ec96199d02db8f5d2fd9e2a391be731a6a36 + +pkgname = r-phastcons100way.ucsc.hg38 diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..c02149761c63 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,32 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=phastCons100way.UCSC.hg38 +_pkgver=3.7.1 +pkgname=r-${_pkgname,,} +pkgver=3.7.1 +pkgrel=3 +pkgdesc='UCSC phastCons conservation scores for hg38' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('Artistic2.0') +depends=( + r + r-bsgenome + r-genomeinfodb + r-genomicranges + r-genomicscores + r-iranges + r-s4vectors +) +source=("https://bioconductor.org/packages/release/data/annotation/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('607ba9035ef1ce21768e4471efe6ec96199d02db8f5d2fd9e2a391be731a6a36') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |