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authorSukanka2022-06-06 18:50:01 +0800
committerSukanka2022-06-06 18:50:01 +0800
commit3e4f249051b831f283552c2e6cfaa68bd2310187 (patch)
tree0690ca197552987749d01ef954be857ba7690899
downloadaur-3e4f249051b831f283552c2e6cfaa68bd2310187.tar.gz
add r-powsc
-rw-r--r--.SRCINFO24
-rw-r--r--PKGBUILD40
2 files changed, 64 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..ae8af1dc6463
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,24 @@
+pkgbase = r-powsc
+ pkgdesc = Simulation, power evaluation, and sample size recommendation for single cell RNA-seq
+ pkgver = 1.4.0
+ pkgrel = 1
+ url = https://bioconductor.org/packages/POWSC
+ arch = any
+ license = GPL
+ depends = r
+ depends = r-biobase
+ depends = r-ggplot2
+ depends = r-limma
+ depends = r-mast
+ depends = r-pheatmap
+ depends = r-rcolorbrewer
+ depends = r-singlecellexperiment
+ depends = r-summarizedexperiment
+ optdepends = r-biocstyle
+ optdepends = r-knitr
+ optdepends = r-rmarkdown
+ optdepends = r-testthat
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/POWSC_1.4.0.tar.gz
+ sha256sums = bc5bc23c33017a8d6d03cf63bd33723969b01c3b5584a4b34780495bb9df2b1c
+
+pkgname = r-powsc
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..a25f761af6aa
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,40 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=POWSC
+_pkgver=1.4.0
+pkgname=r-${_pkgname,,}
+pkgver=1.4.0
+pkgrel=1
+pkgdesc='Simulation, power evaluation, and sample size recommendation for single cell RNA-seq'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+ r
+ r-biobase
+ r-ggplot2
+ r-limma
+ r-mast
+ r-pheatmap
+ r-rcolorbrewer
+ r-singlecellexperiment
+ r-summarizedexperiment
+)
+optdepends=(
+ r-biocstyle
+ r-knitr
+ r-rmarkdown
+ r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('bc5bc23c33017a8d6d03cf63bd33723969b01c3b5584a4b34780495bb9df2b1c')
+
+build() {
+ R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+ install -dm0755 "${pkgdir}/usr/lib/R/library"
+ cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: