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| author | Sukanka | 2022-06-06 18:53:09 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 18:53:09 +0800 |
| commit | e8ee18e8084d68aed8f1631a83917e63e3ce0b5e (patch) | |
| tree | cfa34c00674b823e4bf332c488c9f2f759197e69 | |
| download | aur-e8ee18e8084d68aed8f1631a83917e63e3ce0b5e.tar.gz | |
add r-pram
| -rw-r--r-- | .SRCINFO | 26 | ||||
| -rw-r--r-- | PKGBUILD | 42 |
2 files changed, 68 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..06c616995c1a --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,26 @@ +pkgbase = r-pram + pkgdesc = Pooling RNA-seq datasets for assembling transcript models + pkgver = 1.12.0 + pkgrel = 1 + url = https://bioconductor.org/packages/pram + arch = any + license = GPL + depends = r + depends = r-biocgenerics + depends = r-biocparallel + depends = r-data.table + depends = r-genomeinfodb + depends = r-genomicalignments + depends = r-genomicranges + depends = r-iranges + depends = r-rsamtools + depends = r-rtracklayer + depends = r-s4vectors + optdepends = r-biocstyle + optdepends = r-knitr + optdepends = r-rmarkdown + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/pram_1.12.0.tar.gz + sha256sums = e4e3fd790bac0259d7fd228774de349faed77beaecc96576a48e8fc1e68919ea + +pkgname = r-pram diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..88b2146cb954 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,42 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=pram +_pkgver=1.12.0 +pkgname=r-${_pkgname,,} +pkgver=1.12.0 +pkgrel=1 +pkgdesc='Pooling RNA-seq datasets for assembling transcript models' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biocgenerics + r-biocparallel + r-data.table + r-genomeinfodb + r-genomicalignments + r-genomicranges + r-iranges + r-rsamtools + r-rtracklayer + r-s4vectors +) +optdepends=( + r-biocstyle + r-knitr + r-rmarkdown + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('e4e3fd790bac0259d7fd228774de349faed77beaecc96576a48e8fc1e68919ea') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |