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author | Sukanka | 2022-06-06 18:59:55 +0800 |
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committer | Sukanka | 2022-06-06 18:59:55 +0800 |
commit | 4f3cf633b33d7ef14889767dbd7de2b5d5bbbc00 (patch) | |
tree | 546dd25b9b3fc82de8c459c0a7c5dafaef664a7b | |
download | aur-4f3cf633b33d7ef14889767dbd7de2b5d5bbbc00.tar.gz |
add r-probatch
-rw-r--r-- | .SRCINFO | 44 | ||||
-rw-r--r-- | PKGBUILD | 60 |
2 files changed, 104 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..85a36b5acc09 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,44 @@ +pkgbase = r-probatch + pkgdesc = Tools for Diagnostics and Corrections of Batch Effects in Proteomics + pkgver = 1.11.0 + pkgrel = 1 + url = https://bioconductor.org/packages/proBatch + arch = any + license = GPL + depends = r + depends = r-biobase + depends = r-corrplot + depends = r-data.table + depends = r-dplyr + depends = r-ggfortify + depends = r-ggplot2 + depends = r-lazyeval + depends = r-lubridate + depends = r-magrittr + depends = r-pheatmap + depends = r-preprocesscore + depends = r-purrr + depends = r-pvca + depends = r-rcolorbrewer + depends = r-reshape2 + depends = r-rlang + depends = r-scales + depends = r-sva + depends = r-tibble + depends = r-tidyr + depends = r-viridis + depends = r-wesanderson + depends = r-wgcna + optdepends = r-devtools + optdepends = r-ggpubr + optdepends = r-gridextra + optdepends = r-gtable + optdepends = r-knitr + optdepends = r-rmarkdown + optdepends = r-roxygen2 + optdepends = r-spelling + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/proBatch_1.11.0.tar.gz + sha256sums = a6a93ce35b0e25bce3e0d1c493ba3bb47a94355a4e0b627b63d7b87931fd2689 + +pkgname = r-probatch diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..2d04f15a75c7 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,60 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=proBatch +_pkgver=1.11.0 +pkgname=r-${_pkgname,,} +pkgver=1.11.0 +pkgrel=1 +pkgdesc='Tools for Diagnostics and Corrections of Batch Effects in Proteomics' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biobase + r-corrplot + r-data.table + r-dplyr + r-ggfortify + r-ggplot2 + r-lazyeval + r-lubridate + r-magrittr + r-pheatmap + r-preprocesscore + r-purrr + r-pvca + r-rcolorbrewer + r-reshape2 + r-rlang + r-scales + r-sva + r-tibble + r-tidyr + r-viridis + r-wesanderson + r-wgcna +) +optdepends=( + r-devtools + r-ggpubr + r-gridextra + r-gtable + r-knitr + r-rmarkdown + r-roxygen2 + r-spelling + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('a6a93ce35b0e25bce3e0d1c493ba3bb47a94355a4e0b627b63d7b87931fd2689') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |