add r-proloc

2 files changed, 132 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..ce6e8a228554
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,58 @@
+pkgbase = r-proloc
+	pkgdesc = A unifying bioinformatics framework for spatial proteomics
+	pkgver = 1.36.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/pRoloc
+	arch = x86_64
+	license = GPL
+	depends = r
+	depends = r-biobase
+	depends = r-biocgenerics
+	depends = r-biocparallel
+	depends = r-biomart
+	depends = r-caret
+	depends = r-coda
+	depends = r-dendextend
+	depends = r-e1071
+	depends = r-fnn
+	depends = r-ggplot2
+	depends = r-gtools
+	depends = r-hexbin
+	depends = r-kernlab
+	depends = r-knitr
+	depends = r-laplacesdemon
+	depends = r-mclust
+	depends = r-mixtools
+	depends = r-mlinterfaces
+	depends = r-msnbase
+	depends = r-mvtnorm
+	depends = r-plyr
+	depends = r-proxy
+	depends = r-randomforest
+	depends = r-rcolorbrewer
+	depends = r-rcpp
+	depends = r-rcpparmadillo
+	depends = r-sampling
+	depends = r-scales
+	optdepends = r-akima
+	optdepends = r-annotationdbi
+	optdepends = r-biocstyle
+	optdepends = r-dplyr
+	optdepends = r-fields
+	optdepends = r-go.db
+	optdepends = r-hpar
+	optdepends = r-magick
+	optdepends = r-nipals
+	optdepends = r-prolocdata
+	optdepends = r-reshape
+	optdepends = r-rgl
+	optdepends = r-rmarkdown
+	optdepends = r-roxygen2
+	optdepends = r-rtsne
+	optdepends = r-testthat
+	optdepends = r-vegan
+	optdepends = r-xtable
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/pRoloc_1.36.0.tar.gz
+	sha256sums = ffba6a8083ffd1153c6880f3e5f6522a96f5f1c578d29f68f9691bc059b7df86
+
+pkgname = r-proloc
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..b1a9df406b36
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,74 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=pRoloc
+_pkgver=1.36.0
+pkgname=r-${_pkgname,,}
+pkgver=1.36.0
+pkgrel=1
+pkgdesc='A unifying bioinformatics framework for spatial proteomics'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biobase
+  r-biocgenerics
+  r-biocparallel
+  r-biomart
+  r-caret
+  r-coda
+  r-dendextend
+  r-e1071
+  r-fnn
+  r-ggplot2
+  r-gtools
+  r-hexbin
+  r-kernlab
+  r-knitr
+  r-laplacesdemon
+  r-mclust
+  r-mixtools
+  r-mlinterfaces
+  r-msnbase
+  r-mvtnorm
+  r-plyr
+  r-proxy
+  r-randomforest
+  r-rcolorbrewer
+  r-rcpp
+  r-rcpparmadillo
+  r-sampling
+  r-scales
+)
+optdepends=(
+  r-akima
+  r-annotationdbi
+  r-biocstyle
+  r-dplyr
+  r-fields
+  r-go.db
+  r-hpar
+  r-magick
+  r-nipals
+  r-prolocdata
+  r-reshape
+  r-rgl
+  r-rmarkdown
+  r-roxygen2
+  r-rtsne
+  r-testthat
+  r-vegan
+  r-xtable
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('ffba6a8083ffd1153c6880f3e5f6522a96f5f1c578d29f68f9691bc059b7df86')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: