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authorBioArchLinuxBot2024-03-07 12:02:50 +0000
committerBioArchLinuxBot2024-03-07 12:02:50 +0000
commit253cc2b057f5b80a4581043d09ef4af7519fe9b4 (patch)
tree686d20013d31a669a531c3207a3bd45293ed9ad8
parentc20d69c4a85199ffa7801650596e6a278c0e6e86 (diff)
downloadaur-253cc2b057f5b80a4581043d09ef4af7519fe9b4.tar.gz
[lilac] updated to 1.7.0-2
-rw-r--r--.SRCINFO7
-rw-r--r--PKGBUILD28
2 files changed, 19 insertions, 16 deletions
diff --git a/.SRCINFO b/.SRCINFO
index c60e5e4da4bc..315ce6c87b7b 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,10 +1,10 @@
pkgbase = r-protr
pkgdesc = Generating Various Numerical Representation Schemes for Protein Sequences
pkgver = 1.7.0
- pkgrel = 1
+ pkgrel = 2
url = https://cran.r-project.org/package=protr
arch = any
- license = BSD
+ license = BSD-3-Clause
depends = r
optdepends = r-biostrings
optdepends = r-doparallel
@@ -14,6 +14,7 @@ pkgbase = r-protr
optdepends = r-org.hs.eg.db
optdepends = r-rmarkdown
source = https://cran.r-project.org/src/contrib/protr_1.7-0.tar.gz
- sha256sums = 44c22a7fbe169496f2bf3d25ac27044da36d746fcf1bb4f5424461d17abc6741
+ md5sums = e13e53d13fd27b7e4718a32df6ceeac5
+ b2sums = 6ef12b2ccacec70370e81fa055a3f66b1f2335eb18b5dfe1b1afd346c0a4b7915d8941b58765ab704718a484a4f886efbd1145c2fd3bcddab1083fd803a050db
pkgname = r-protr
diff --git a/PKGBUILD b/PKGBUILD
index 8f31f4734c51..658ee2f812af 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,15 +1,14 @@
-# system requirements: ncbi-blast+ (see<https://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastDocs&DOC_TYPE=Download>)
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=protr
_pkgver=1.7-0
pkgname=r-${_pkgname,,}
-pkgver=1.7.0
-pkgrel=1
-pkgdesc='Generating Various Numerical Representation Schemes for Protein Sequences'
-arch=('any')
-url="https://cran.r-project.org/package=${_pkgname}"
-license=('BSD')
+pkgver=${_pkgver//-/.}
+pkgrel=2
+pkgdesc="Generating Various Numerical Representation Schemes for Protein Sequences"
+arch=(any)
+url="https://cran.r-project.org/package=$_pkgname"
+license=('BSD-3-Clause')
depends=(
r
)
@@ -23,15 +22,18 @@ optdepends=(
r-rmarkdown
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('44c22a7fbe169496f2bf3d25ac27044da36d746fcf1bb4f5424461d17abc6741')
+md5sums=('e13e53d13fd27b7e4718a32df6ceeac5')
+b2sums=('6ef12b2ccacec70370e81fa055a3f66b1f2335eb18b5dfe1b1afd346c0a4b7915d8941b58765ab704718a484a4f886efbd1145c2fd3bcddab1083fd803a050db')
build() {
- R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
}
package() {
- install -dm0755 "${pkgdir}/usr/lib/R/library"
- cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
- install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+
+ install -d "$pkgdir/usr/share/licenses/$pkgname"
+ ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
-# vim:set ts=2 sw=2 et: