add r-protr

2 files changed, 56 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..761a2f1216d6
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,19 @@
+pkgbase = r-protr
+	pkgdesc = Generating Various Numerical Representation Schemes for Protein Sequences
+	pkgver = 1.6.2
+	pkgrel = 4
+	url = https://cran.r-project.org/package=protr
+	arch = any
+	license = BSD
+	depends = r
+	optdepends = r-biostrings
+	optdepends = r-doparallel
+	optdepends = r-foreach
+	optdepends = r-gosemsim
+	optdepends = r-knitr
+	optdepends = r-org.hs.eg.db
+	optdepends = r-rmarkdown
+	source = https://cran.r-project.org/src/contrib/protr_1.6-2.tar.gz
+	sha256sums = 56f5db5f4b0f71f59c89dbeb587f422157f014d3261a57a4173c608c278e6f8f
+
+pkgname = r-protr
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..81879ec267a7
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,37 @@
+# system requirements: ncbi-blast+ (see<https://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastDocs&DOC_TYPE=Download>)
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=protr
+_pkgver=1.6-2
+pkgname=r-${_pkgname,,}
+pkgver=1.6.2
+pkgrel=4
+pkgdesc='Generating Various Numerical Representation Schemes for Protein Sequences'
+arch=('any')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('BSD')
+depends=(
+  r
+)
+optdepends=(
+  r-biostrings
+  r-doparallel
+  r-foreach
+  r-gosemsim
+  r-knitr
+  r-org.hs.eg.db
+  r-rmarkdown
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('56f5db5f4b0f71f59c89dbeb587f422157f014d3261a57a4173c608c278e6f8f')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+  install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+}
+# vim:set ts=2 sw=2 et: