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authorBioArchLinuxBot2024-01-11 12:01:47 +0000
committerBioArchLinuxBot2024-01-11 12:01:47 +0000
commitc1f7b742d23d617486f08129cff8ab2ed57ea849 (patch)
tree3f4540314605a48deac0b1151fff931e82645da6
parentfd46b96b914a283363ba2daed684ab0d6779b13c (diff)
downloadaur-c1f7b742d23d617486f08129cff8ab2ed57ea849.tar.gz
[lilac] updated to 0.3.4-2
-rw-r--r--.SRCINFO14
-rw-r--r--PKGBUILD43
2 files changed, 37 insertions, 20 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 0b9b2cbf13e7..9e327a56b6e8 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,13 +1,16 @@
pkgbase = r-proxyc
pkgdesc = Computes Proximity in Large Sparse Matrices
pkgver = 0.3.4
- pkgrel = 1
+ pkgrel = 2
url = https://cran.r-project.org/package=proxyC
arch = x86_64
- license = GPL
- depends = r
+ license = GPL3
+ checkdepends = r-entropy
+ checkdepends = r-proxy
+ checkdepends = r-testthat
+ makedepends = r-rcpparmadillo
+ depends = blas
depends = r-rcpp
- depends = r-rcpparmadillo
depends = r-rcppparallel
optdepends = r-entropy
optdepends = r-knitr
@@ -15,6 +18,7 @@ pkgbase = r-proxyc
optdepends = r-rmarkdown
optdepends = r-testthat
source = https://cran.r-project.org/src/contrib/proxyC_0.3.4.tar.gz
- sha256sums = f39d1d3d34b4e26694e3916002ea370b2f4e745c0992e718bb024ed03a2b78ea
+ md5sums = e57fe4d1fd003337b06845fe6c8cd591
+ b2sums = c35d2ec7a6f506b0fb9f5ad3e0392289d147731a1f20d065ee9bde4cb8474e95854bc78be146cb64ba8b526eedc9cd2adbb44e6ef39b3523525736b80e95f901
pkgname = r-proxyc
diff --git a/PKGBUILD b/PKGBUILD
index 611192970642..77b758ddc361 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,21 +1,28 @@
-# system requirements: C++11
-# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=proxyC
_pkgver=0.3.4
pkgname=r-${_pkgname,,}
-pkgver=0.3.4
-pkgrel=1
-pkgdesc='Computes Proximity in Large Sparse Matrices'
-arch=('x86_64')
-url="https://cran.r-project.org/package=${_pkgname}"
-license=('GPL')
+pkgver=${_pkgver//-/.}
+pkgrel=2
+pkgdesc="Computes Proximity in Large Sparse Matrices"
+arch=(x86_64)
+url="https://cran.r-project.org/package=$_pkgname"
+license=(GPL3)
depends=(
- r
+ blas
r-rcpp
- r-rcpparmadillo
r-rcppparallel
)
+makedepends=(
+ r-rcpparmadillo
+)
+checkdepends=(
+ r-entropy
+ r-proxy
+ r-testthat
+)
optdepends=(
r-entropy
r-knitr
@@ -24,14 +31,20 @@ optdepends=(
r-testthat
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('f39d1d3d34b4e26694e3916002ea370b2f4e745c0992e718bb024ed03a2b78ea')
+md5sums=('e57fe4d1fd003337b06845fe6c8cd591')
+b2sums=('c35d2ec7a6f506b0fb9f5ad3e0392289d147731a1f20d065ee9bde4cb8474e95854bc78be146cb64ba8b526eedc9cd2adbb44e6ef39b3523525736b80e95f901')
build() {
- R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
+}
+
+check() {
+ cd "$_pkgname/tests"
+ R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
}
package() {
- install -dm0755 "${pkgdir}/usr/lib/R/library"
- cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
-# vim:set ts=2 sw=2 et: