add r-qfeatures

2 files changed, 110 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..8af94aa8b435
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,47 @@
+pkgbase = r-qfeatures
+	pkgdesc = Quantitative features for mass spectrometry data
+	pkgver = 1.6.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/QFeatures
+	arch = any
+	license = Artistic2.0
+	depends = r
+	depends = r-annotationfilter
+	depends = r-biobase
+	depends = r-biocgenerics
+	depends = r-igraph
+	depends = r-iranges
+	depends = r-lazyeval
+	depends = r-mscoreutils
+	depends = r-multiassayexperiment
+	depends = r-plotly
+	depends = r-protgenerics
+	depends = r-s4vectors
+	depends = r-summarizedexperiment
+	optdepends = r-biocstyle
+	optdepends = r-complexheatmap
+	optdepends = r-dplyr
+	optdepends = r-dt
+	optdepends = r-ggplot2
+	optdepends = r-gplots
+	optdepends = r-hdf5array
+	optdepends = r-impute
+	optdepends = r-imputelcmd
+	optdepends = r-knitr
+	optdepends = r-limma
+	optdepends = r-magrittr
+	optdepends = r-matrixstats
+	optdepends = r-msdata
+	optdepends = r-norm
+	optdepends = r-pcamethods
+	optdepends = r-preprocesscore
+	optdepends = r-rmarkdown
+	optdepends = r-shiny
+	optdepends = r-shinydashboard
+	optdepends = r-singlecellexperiment
+	optdepends = r-testthat
+	optdepends = r-vsn
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/QFeatures_1.6.0.tar.gz
+	sha256sums = 97ef47682bf6fe35b542c29e5dcd033419aae20b25af9940f0a7911d10e4e1fb
+
+pkgname = r-qfeatures
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..419ce50d36e1
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,63 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=QFeatures
+_pkgver=1.6.0
+pkgname=r-${_pkgname,,}
+pkgver=1.6.0
+pkgrel=1
+pkgdesc='Quantitative features for mass spectrometry data'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-annotationfilter
+  r-biobase
+  r-biocgenerics
+  r-igraph
+  r-iranges
+  r-lazyeval
+  r-mscoreutils
+  r-multiassayexperiment
+  r-plotly
+  r-protgenerics
+  r-s4vectors
+  r-summarizedexperiment
+)
+optdepends=(
+  r-biocstyle
+  r-complexheatmap
+  r-dplyr
+  r-dt
+  r-ggplot2
+  r-gplots
+  r-hdf5array
+  r-impute
+  r-imputelcmd
+  r-knitr
+  r-limma
+  r-magrittr
+  r-matrixstats
+  r-msdata
+  r-norm
+  r-pcamethods
+  r-preprocesscore
+  r-rmarkdown
+  r-shiny
+  r-shinydashboard
+  r-singlecellexperiment
+  r-testthat
+  r-vsn
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('97ef47682bf6fe35b542c29e5dcd033419aae20b25af9940f0a7911d10e4e1fb')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: