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authorBioArchLinuxBot2024-05-11 12:03:35 +0000
committerBioArchLinuxBot2024-05-11 12:03:35 +0000
commit5e694111e0ec731bb02b3b0b74eaed8d4ef966c2 (patch)
tree4a9112560d334f495ae569422be9194a354d7065
parente9dc9237e670cdf1eefd372d6645202c09d636d9 (diff)
downloadaur-5e694111e0ec731bb02b3b0b74eaed8d4ef966c2.tar.gz
[lilac] updated to 1.22.0-1
-rw-r--r--.SRCINFO11
-rw-r--r--PKGBUILD26
2 files changed, 19 insertions, 18 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 9b9109654c7f..7609cf480ae8 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,20 +1,21 @@
pkgbase = r-qsutils
pkgdesc = Quasispecies Diversity
- pkgver = 1.20.0
+ pkgver = 1.22.0
pkgrel = 1
url = https://bioconductor.org/packages/QSutils
arch = any
- license = custom
- depends = r
+ license = GPL-2.0-only
depends = r-ape
depends = r-biocgenerics
depends = r-biostrings
depends = r-psych
+ depends = r-pwalign
optdepends = r-biocstyle
optdepends = r-ggplot2
optdepends = r-knitr
optdepends = r-rmarkdown
- source = https://bioconductor.org/packages/release/bioc/src/contrib/QSutils_1.20.0.tar.gz
- sha256sums = d964b12cf00cdf9ca665bddc2e56083b3a5e6a2751e5605790c7ce7894ac238c
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/QSutils_1.22.0.tar.gz
+ md5sums = e22810c5de4ffad732597e641c47b875
+ b2sums = f3dfd16562db0643d532e67df559131caa6afee60cfca44fdd185b72b95fe782a850a1ce594c823556a1ccbce4654caa57c2d9d593a755a931c73b41a6b5a3c1
pkgname = r-qsutils
diff --git a/PKGBUILD b/PKGBUILD
index 0ac4491ef50a..22aae47ce632 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,20 +1,20 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=QSutils
-_pkgver=1.20.0
+_pkgver=1.22.0
pkgname=r-${_pkgname,,}
-pkgver=1.20.0
+pkgver=${_pkgver//-/.}
pkgrel=1
-pkgdesc='Quasispecies Diversity'
-arch=('any')
-url="https://bioconductor.org/packages/${_pkgname}"
-license=('custom')
+pkgdesc="Quasispecies Diversity"
+arch=(any)
+url="https://bioconductor.org/packages/$_pkgname"
+license=('GPL-2.0-only')
depends=(
- r
r-ape
r-biocgenerics
r-biostrings
r-psych
+ r-pwalign
)
optdepends=(
r-biocstyle
@@ -23,15 +23,15 @@ optdepends=(
r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('d964b12cf00cdf9ca665bddc2e56083b3a5e6a2751e5605790c7ce7894ac238c')
+md5sums=('e22810c5de4ffad732597e641c47b875')
+b2sums=('f3dfd16562db0643d532e67df559131caa6afee60cfca44fdd185b72b95fe782a850a1ce594c823556a1ccbce4654caa57c2d9d593a755a931c73b41a6b5a3c1')
build() {
- R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+ mkdir build
+ R CMD INSTALL -l build "$_pkgname"
}
package() {
- install -dm0755 "${pkgdir}/usr/lib/R/library"
- cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
- install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
-# vim:set ts=2 sw=2 et: