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| author | BioArchLinuxBot | 2024-05-08 12:04:06 +0000 |
|---|---|---|
| committer | BioArchLinuxBot | 2024-05-08 12:04:06 +0000 |
| commit | 40dd44cac80b011b1a05ac2b3fa3567f4f8c875a (patch) | |
| tree | 4cd04e93ecdceaaa10a9199f4838e04ba281a54e | |
| parent | c629d0e4354cfa21d6e2f22aa28a8aed037db42c (diff) | |
| download | aur-r-raer.tar.gz | |
[lilac] updated to 1.2.0-1
| -rw-r--r-- | .SRCINFO | 14 | ||||
| -rw-r--r-- | PKGBUILD | 12 |
2 files changed, 15 insertions, 11 deletions
@@ -1,6 +1,6 @@ pkgbase = r-raer pkgdesc = RNA editing tools in R - pkgver = 1.0.2 + pkgver = 1.2.0 pkgrel = 1 url = https://bioconductor.org/packages/raer arch = x86_64 @@ -8,24 +8,25 @@ pkgbase = r-raer checkdepends = r-edger checkdepends = r-testthat makedepends = r-rhtslib + depends = bzip2 depends = curl depends = r-biocgenerics depends = r-biocparallel depends = r-biostrings depends = r-bsgenome depends = r-cli - depends = r-data.table depends = r-genomeinfodb depends = r-genomicalignments depends = r-genomicfeatures depends = r-genomicranges depends = r-iranges - depends = r-r.utils depends = r-rsamtools depends = r-rtracklayer depends = r-s4vectors depends = r-singlecellexperiment depends = r-summarizedexperiment + depends = xz + depends = zlib optdepends = r-annotationhub optdepends = r-biocstyle optdepends = r-bsgenome.hsapiens.ncbi.grch38 @@ -43,8 +44,9 @@ pkgbase = r-raer optdepends = r-snplocs.hsapiens.dbsnp144.grch38 optdepends = r-testthat optdepends = r-txdb.hsapiens.ucsc.hg38.knowngene - source = https://bioconductor.org/packages/release/bioc/src/contrib/raer_1.0.2.tar.gz - md5sums = da2d27f76962c7d534f36f05815670d3 - b2sums = 0079593d5d24b9500788c10e025364972d4d8d0f8eede7ee58a8ace5e9bb0d2f83cdbe89b377936bb855c0302662c82c340a3026ba82266034c380578021a1fa + optdepends = r-txdbmaker + source = https://bioconductor.org/packages/release/bioc/src/contrib/raer_1.2.0.tar.gz + md5sums = 5d4a84abe3ffb879560d098a51e6c21e + b2sums = ad54ccd4d31dc8c699b4a1e15f518c50db6cde5f70688b69eec858c30abac4aa3b800edf44982964a23055dcb1efe1909d580c13e7cb155f16cc930b4bd9dcaa pkgname = r-raer @@ -1,7 +1,7 @@ # Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com> _pkgname=raer -_pkgver=1.0.2 +_pkgver=1.2.0 pkgname=r-${_pkgname,,} pkgver=${_pkgver//-/.} pkgrel=1 @@ -10,24 +10,25 @@ arch=(x86_64) url="https://bioconductor.org/packages/$_pkgname" license=('MIT') depends=( + bzip2 curl r-biocgenerics r-biocparallel r-biostrings r-bsgenome r-cli - r-data.table r-genomeinfodb r-genomicalignments r-genomicfeatures r-genomicranges r-iranges - r-r.utils r-rsamtools r-rtracklayer r-s4vectors r-singlecellexperiment r-summarizedexperiment + xz + zlib ) makedepends=( r-rhtslib @@ -54,10 +55,11 @@ optdepends=( r-snplocs.hsapiens.dbsnp144.grch38 r-testthat r-txdb.hsapiens.ucsc.hg38.knowngene + r-txdbmaker ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -md5sums=('da2d27f76962c7d534f36f05815670d3') -b2sums=('0079593d5d24b9500788c10e025364972d4d8d0f8eede7ee58a8ace5e9bb0d2f83cdbe89b377936bb855c0302662c82c340a3026ba82266034c380578021a1fa') +md5sums=('5d4a84abe3ffb879560d098a51e6c21e') +b2sums=('ad54ccd4d31dc8c699b4a1e15f518c50db6cde5f70688b69eec858c30abac4aa3b800edf44982964a23055dcb1efe1909d580c13e7cb155f16cc930b4bd9dcaa') build() { mkdir build |