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authorBioArchLinuxBot2023-03-31 12:03:33 +0000
committerBioArchLinuxBot2023-03-31 12:03:33 +0000
commite7d85b20b694f89fa9fd1e6c7069e5c871089dc7 (patch)
treee31e95fdefac978bc03f952017e959cc66e95bb9
parentec4bf847e32067ee2c72e23993a40a021d255bb7 (diff)
downloadaur-e7d85b20b694f89fa9fd1e6c7069e5c871089dc7.tar.gz
[lilac] updated to 1.8.6-1
-rw-r--r--.SRCINFO11
-rw-r--r--PKGBUILD11
2 files changed, 14 insertions, 8 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 5c2a5d2bde27..035312cd9e36 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,19 +1,21 @@
pkgbase = r-recountmethylation
pkgdesc = Access and analyze DNA methylation database compilations
- pkgver = 1.8.3
+ pkgver = 1.8.6
pkgrel = 1
url = https://bioconductor.org/packages/recountmethylation
arch = any
license = Artistic2.0
depends = r
+ depends = r-basilisk
depends = r-biocfilecache
+ depends = r-delayedmatrixstats
depends = r-hdf5array
depends = r-minfi
depends = r-r.utils
depends = r-rcurl
+ depends = r-reticulate
depends = r-rhdf5
depends = r-s4vectors
- depends = r-illuminahumanmethylation450kmanifest
optdepends = r-annotationhub
optdepends = r-biocstyle
optdepends = r-experimenthub
@@ -22,9 +24,10 @@ pkgbase = r-recountmethylation
optdepends = r-gridextra
optdepends = r-knitr
optdepends = r-limma
+ optdepends = r-minfidata
optdepends = r-rmarkdown
optdepends = r-testthat
- source = https://bioconductor.org/packages/release/bioc/src/contrib/recountmethylation_1.8.3.tar.gz
- sha256sums = 788aa485944c9e6c903932c88d156974d3239ac80b0cd057247fe9c65191ac13
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/recountmethylation_1.8.6.tar.gz
+ sha256sums = 1677f4f64ff60636147b40a12675e076199cd281601d5f658a5c0e7c89d82adb
pkgname = r-recountmethylation
diff --git a/PKGBUILD b/PKGBUILD
index cc0116405a2e..ead4c16086d9 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,9 +1,9 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=recountmethylation
-_pkgver=1.8.3
+_pkgver=1.8.6
pkgname=r-${_pkgname,,}
-pkgver=1.8.3
+pkgver=1.8.6
pkgrel=1
pkgdesc='Access and analyze DNA methylation database compilations'
arch=('any')
@@ -11,14 +11,16 @@ url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
+ r-basilisk
r-biocfilecache
+ r-delayedmatrixstats
r-hdf5array
r-minfi
r-r.utils
r-rcurl
+ r-reticulate
r-rhdf5
r-s4vectors
- r-illuminahumanmethylation450kmanifest
)
optdepends=(
r-annotationhub
@@ -29,11 +31,12 @@ optdepends=(
r-gridextra
r-knitr
r-limma
+ r-minfidata
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('788aa485944c9e6c903932c88d156974d3239ac80b0cd057247fe9c65191ac13')
+sha256sums=('1677f4f64ff60636147b40a12675e076199cd281601d5f658a5c0e7c89d82adb')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"