add r-recoup

2 files changed, 92 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..362f73e8fda5
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,38 @@
+pkgbase = r-recoup
+	pkgdesc = An R package for the creation of complex genomic profile plots
+	pkgver = 1.24.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/recoup
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-biocgenerics
+	depends = r-biomart
+	depends = r-biostrings
+	depends = r-circlize
+	depends = r-complexheatmap
+	depends = r-genomeinfodb
+	depends = r-genomicalignments
+	depends = r-genomicfeatures
+	depends = r-genomicranges
+	depends = r-ggplot2
+	depends = r-httr
+	depends = r-iranges
+	depends = r-rsamtools
+	depends = r-rsqlite
+	depends = r-rtracklayer
+	depends = r-s4vectors
+	depends = r-stringr
+	optdepends = r-biocmanager
+	optdepends = r-biocstyle
+	optdepends = r-bsgenome
+	optdepends = r-grid
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-rmysql
+	optdepends = r-runit
+	optdepends = r-zoo
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/recoup_1.24.0.tar.gz
+	sha256sums = 7772a4602f972fff71047c3216a3a4d8eec68dca9e4a720b073da4f4b28334e3
+
+pkgname = r-recoup
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..8a9ec200dd56
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,54 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=recoup
+_pkgver=1.24.0
+pkgname=r-${_pkgname,,}
+pkgver=1.24.0
+pkgrel=1
+pkgdesc='An R package for the creation of complex genomic profile plots'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biocgenerics
+  r-biomart
+  r-biostrings
+  r-circlize
+  r-complexheatmap
+  r-genomeinfodb
+  r-genomicalignments
+  r-genomicfeatures
+  r-genomicranges
+  r-ggplot2
+  r-httr
+  r-iranges
+  r-rsamtools
+  r-rsqlite
+  r-rtracklayer
+  r-s4vectors
+  r-stringr
+)
+optdepends=(
+  r-biocmanager
+  r-biocstyle
+  r-bsgenome
+  r-grid
+  r-knitr
+  r-rmarkdown
+  r-rmysql
+  r-runit
+  r-zoo
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('7772a4602f972fff71047c3216a3a4d8eec68dca9e4a720b073da4f4b28334e3')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: