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authorViktor Drobot2022-01-17 23:07:22 +0300
committerViktor Drobot2022-01-17 23:07:22 +0300
commitf6b86a3249edcf862daedb7b302751b3f6013bf7 (patch)
treec80298ead1e9aea5947cff5aa94cc1e4265e4791
parent3d95ca547528345098a05c3ddc8727a1cfba1dff (diff)
downloadaur-f6b86a3249edcf862daedb7b302751b3f6013bf7.tar.gz
Fix PKGBUILD
-rw-r--r--.SRCINFO3
-rw-r--r--PKGBUILD9
2 files changed, 5 insertions, 7 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 363eeaa46394..46556642b1e0 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -12,8 +12,9 @@ pkgbase = r-rhtslib
depends = bzip2
depends = xz
depends = curl
- optdepends = r-biocstyle
optdepends = r-knitr
+ optdepends = r-rmarkdown
+ optdepends = r-biocstyle
options = staticlibs
source = https://bioconductor.org/packages/release/bioc/src/contrib/Rhtslib_1.26.0.tar.gz
sha256sums = 24bba61616e7d4fc57fda86172486b92ffcae31d1a7183d7b8ee29e324ff955f
diff --git a/PKGBUILD b/PKGBUILD
index 3c6359a2885f..53120c8d64ef 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -12,20 +12,17 @@ url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
license=(LGPL2)
depends=(r r-zlibbioc bzip2 xz curl)
makedepends=(make)
-optdepends=(r-biocstyle r-knitr)
+optdepends=(r-knitr r-rmarkdown r-biocstyle)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
sha256sums=('24bba61616e7d4fc57fda86172486b92ffcae31d1a7183d7b8ee29e324ff955f')
options=(staticlibs)
build() {
- cd "${srcdir}"
-
- R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l ${srcdir}
+ R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l "${srcdir}"
}
package() {
- cd "${srcdir}"
-
install -dm0755 "${pkgdir}/usr/lib/R/library"
+
cp -a --no-preserve=ownership "${_bcname}" "${pkgdir}/usr/lib/R/library"
}