add r-ribocrypt

2 files changed, 79 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..d508413d5c03
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,31 @@
+pkgbase = r-ribocrypt
+	pkgdesc = Interactive visualization in genomics
+	pkgver = 1.2.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/RiboCrypt
+	arch = any
+	license = MIT
+	depends = r
+	depends = r-biocgenerics
+	depends = r-biocparallel
+	depends = r-biostrings
+	depends = r-data.table
+	depends = r-dplyr
+	depends = r-genomeinfodb
+	depends = r-genomicfeatures
+	depends = r-genomicranges
+	depends = r-ggplot2
+	depends = r-iranges
+	depends = r-orfik
+	depends = r-plotly
+	depends = r-rlang
+	optdepends = r-biocstyle
+	optdepends = r-bsgenome
+	optdepends = r-bsgenome.hsapiens.ucsc.hg19
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/RiboCrypt_1.2.0.tar.gz
+	sha256sums = 10d620858a44b7cdf1fe51e82821dae863954cbd127add9c2c342d4da3493e1c
+
+pkgname = r-ribocrypt
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..0e01a1b94d26
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,48 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=RiboCrypt
+_pkgver=1.2.0
+pkgname=r-${_pkgname,,}
+pkgver=1.2.0
+pkgrel=1
+pkgdesc='Interactive visualization in genomics'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('MIT')
+depends=(
+  r
+  r-biocgenerics
+  r-biocparallel
+  r-biostrings
+  r-data.table
+  r-dplyr
+  r-genomeinfodb
+  r-genomicfeatures
+  r-genomicranges
+  r-ggplot2
+  r-iranges
+  r-orfik
+  r-plotly
+  r-rlang
+)
+optdepends=(
+  r-biocstyle
+  r-bsgenome
+  r-bsgenome.hsapiens.ucsc.hg19
+  r-knitr
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('10d620858a44b7cdf1fe51e82821dae863954cbd127add9c2c342d4da3493e1c')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+  install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+}
+# vim:set ts=2 sw=2 et: