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authorPekka Ristola2023-12-12 22:24:34 +0200
committerPekka Ristola2023-12-12 22:24:34 +0200
commitff4908f1b1d375767a6e9e04c9d1b3c25db9b3a6 (patch)
tree188119c5af62524e150e13a6bff77a2503299a59
downloadaur-ff4908f1b1d375767a6e9e04c9d1b3c25db9b3a6.tar.gz
Version 1.6.0
-rw-r--r--.SRCINFO33
-rw-r--r--PKGBUILD49
2 files changed, 82 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..e00ba7e34050
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,33 @@
+pkgbase = r-rifi
+ pkgdesc = 'rifi' analyses data from rifampicin time series created by microarray or RNAseq
+ pkgver = 1.6.0
+ pkgrel = 1
+ url = https://bioconductor.org/packages/rifi
+ arch = any
+ license = GPL3
+ depends = r-car
+ depends = r-cowplot
+ depends = r-domc
+ depends = r-dplyr
+ depends = r-egg
+ depends = r-foreach
+ depends = r-ggplot2
+ depends = r-nls2
+ depends = r-reshape2
+ depends = r-rlang
+ depends = r-rtracklayer
+ depends = r-s4vectors
+ depends = r-scales
+ depends = r-stringr
+ depends = r-summarizedexperiment
+ depends = r-tibble
+ optdepends = r-biocstyle
+ optdepends = r-desctools
+ optdepends = r-devtools
+ optdepends = r-knitr
+ optdepends = r-rmarkdown
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/rifi_1.6.0.tar.gz
+ md5sums = 5d070b26ca40e04e4e3f9851853caa48
+ sha256sums = 82ea553367f6850b21ce41e9e1e791f269f1ed5c782a1ded795a69633ee71634
+
+pkgname = r-rifi
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..f7a120b6f04b
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,49 @@
+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+
+_pkgname=rifi
+_pkgver=1.6.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="'rifi' analyses data from rifampicin time series created by microarray or RNAseq"
+arch=(any)
+url="https://bioconductor.org/packages/${_pkgname}"
+license=(GPL3)
+depends=(
+ r-car
+ r-cowplot
+ r-domc
+ r-dplyr
+ r-egg
+ r-foreach
+ r-ggplot2
+ r-nls2
+ r-reshape2
+ r-rlang
+ r-rtracklayer
+ r-s4vectors
+ r-scales
+ r-stringr
+ r-summarizedexperiment
+ r-tibble
+)
+optdepends=(
+ r-biocstyle
+ r-desctools
+ r-devtools
+ r-knitr
+ r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('5d070b26ca40e04e4e3f9851853caa48')
+sha256sums=('82ea553367f6850b21ce41e9e1e791f269f1ed5c782a1ded795a69633ee71634')
+
+build() {
+ mkdir -p build
+ R CMD INSTALL "$_pkgname" -l build
+}
+
+package() {
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+}