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| author | Sukanka | 2022-06-06 20:55:34 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 20:55:34 +0800 |
| commit | a9a8e8d95667e41cb437059c21eec3bb764b5acf (patch) | |
| tree | 78131322f56728aebc06bc7d44813a533ad5c097 | |
| download | aur-a9a8e8d95667e41cb437059c21eec3bb764b5acf.tar.gz | |
add r-rlassocox
| -rw-r--r-- | .SRCINFO | 15 | ||||
| -rw-r--r-- | PKGBUILD | 31 |
2 files changed, 46 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..af71224a511a --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,15 @@ +pkgbase = r-rlassocox + pkgdesc = A reweighted Lasso-Cox by integrating gene interaction information + pkgver = 1.4.0 + pkgrel = 1 + url = https://bioconductor.org/packages/RLassoCox + arch = any + license = Artistic2.0 + depends = r + depends = r-glmnet + depends = r-igraph + optdepends = r-knitr + source = https://bioconductor.org/packages/release/bioc/src/contrib/RLassoCox_1.4.0.tar.gz + sha256sums = cbad94c59f644db4b1825b4b9c5aef5839db5213f8d9f42c13c5f0cd3bb47ba6 + +pkgname = r-rlassocox diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..4534d3be9d26 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,31 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=RLassoCox +_pkgver=1.4.0 +pkgname=r-${_pkgname,,} +pkgver=1.4.0 +pkgrel=1 +pkgdesc='A reweighted Lasso-Cox by integrating gene interaction information' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('Artistic2.0') +depends=( + r + r-glmnet + r-igraph +) +optdepends=( + r-knitr +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('cbad94c59f644db4b1825b4b9c5aef5839db5213f8d9f42c13c5f0cd3bb47ba6') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |