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authorSukanka2022-06-06 21:11:04 +0800
committerSukanka2022-06-06 21:11:04 +0800
commit2e35b08f5e5bb63415f4471defd961dd94353b16 (patch)
tree4a4d1c32b2e8e99492e64660192c9c1b821c4aa5
downloadaur-2e35b08f5e5bb63415f4471defd961dd94353b16.tar.gz
add r-rnaseqcomp
-rw-r--r--.SRCINFO16
-rw-r--r--PKGBUILD32
2 files changed, 48 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..36f8ec81e194
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,16 @@
+pkgbase = r-rnaseqcomp
+ pkgdesc = Benchmarks for RNA-seq Quantification Pipelines
+ pkgver = 1.26.0
+ pkgrel = 1
+ url = https://bioconductor.org/packages/rnaseqcomp
+ arch = any
+ license = GPL
+ depends = r
+ depends = r-rcolorbrewer
+ optdepends = r-biocstyle
+ optdepends = r-knitr
+ optdepends = r-rmarkdown
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/rnaseqcomp_1.26.0.tar.gz
+ sha256sums = 9fc660fcbedc931c1170ff750064442a5cde1b54f98627b5352d5a80d2a6edbe
+
+pkgname = r-rnaseqcomp
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..49c1d8d6794b
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,32 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=rnaseqcomp
+_pkgver=1.26.0
+pkgname=r-${_pkgname,,}
+pkgver=1.26.0
+pkgrel=1
+pkgdesc='Benchmarks for RNA-seq Quantification Pipelines'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+ r
+ r-rcolorbrewer
+)
+optdepends=(
+ r-biocstyle
+ r-knitr
+ r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('9fc660fcbedc931c1170ff750064442a5cde1b54f98627b5352d5a80d2a6edbe')
+
+build() {
+ R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+ install -dm0755 "${pkgdir}/usr/lib/R/library"
+ cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: