add r-safe

2 files changed, 66 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..78012ca401cd
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,25 @@
+pkgbase = r-safe
+	pkgdesc = Significance Analysis of Function and Expression
+	pkgver = 3.36.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/safe
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-annotationdbi
+	depends = r-biobase
+	depends = r-sparsem
+	optdepends = r-breastcancerupp
+	optdepends = r-dorng
+	optdepends = r-foreach
+	optdepends = r-go.db
+	optdepends = r-gostats
+	optdepends = r-hgu133a.db
+	optdepends = r-pfam.db
+	optdepends = r-reactome.db
+	optdepends = r-rgraphviz
+	optdepends = r-survival
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/safe_3.36.0.tar.gz
+	sha256sums = db243291e7a4d1691e2f11ae1247308433666c8ae26a5964e0b521f2beb81da6
+
+pkgname = r-safe
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..b946962017bb
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,41 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=safe
+_pkgver=3.36.0
+pkgname=r-${_pkgname,,}
+pkgver=3.36.0
+pkgrel=1
+pkgdesc='Significance Analysis of Function and Expression'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-annotationdbi
+  r-biobase
+  r-sparsem
+)
+optdepends=(
+  r-breastcancerupp
+  r-dorng
+  r-foreach
+  r-go.db
+  r-gostats
+  r-hgu133a.db
+  r-pfam.db
+  r-reactome.db
+  r-rgraphviz
+  r-survival
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('db243291e7a4d1691e2f11ae1247308433666c8ae26a5964e0b521f2beb81da6')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: