add r-scbn

2 files changed, 44 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..585b201c2abe
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,14 @@
+pkgbase = r-scbn
+	pkgdesc = A statistical normalization method and differential expression analysis for RNA-seq data between different species
+	pkgver = 1.14.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/SCBN
+	arch = any
+	license = GPL
+	depends = r
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/SCBN_1.14.0.tar.gz
+	sha256sums = 4af53bf73b90f8ac47bab62f0879bb6a8429b13091538139827683a714cfe2c1
+
+pkgname = r-scbn
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..3ef8b1ace9c6
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,30 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=SCBN
+_pkgver=1.14.0
+pkgname=r-${_pkgname,,}
+pkgver=1.14.0
+pkgrel=1
+pkgdesc='A statistical normalization method and differential expression analysis for RNA-seq data between different species'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+)
+optdepends=(
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('4af53bf73b90f8ac47bab62f0879bb6a8429b13091538139827683a714cfe2c1')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: