add r-selectksigs

2 files changed, 62 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..4aff27ce4dc7
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,23 @@
+pkgbase = r-selectksigs
+	pkgdesc = Selecting the number of mutational signatures using a perplexity-based measure and cross-validation
+	pkgver = 1.8.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/selectKSigs
+	arch = x86_64
+	license = GPL
+	depends = r
+	depends = r-gtools
+	depends = r-hilda
+	depends = r-magrittr
+	depends = r-rcpp
+	optdepends = r-biocstyle
+	optdepends = r-dplyr
+	optdepends = r-ggplot2
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	optdepends = r-tidyr
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/selectKSigs_1.8.0.tar.gz
+	sha256sums = 09d8f77065dc14503d306705f164c946ff5c83caececcc437b4f96d6a65a8b03
+
+pkgname = r-selectksigs
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..8bd38d218f6e
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,39 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=selectKSigs
+_pkgver=1.8.0
+pkgname=r-${_pkgname,,}
+pkgver=1.8.0
+pkgrel=1
+pkgdesc='Selecting the number of mutational signatures using a perplexity-based measure and cross-validation'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-gtools
+  r-hilda
+  r-magrittr
+  r-rcpp
+)
+optdepends=(
+  r-biocstyle
+  r-dplyr
+  r-ggplot2
+  r-knitr
+  r-rmarkdown
+  r-testthat
+  r-tidyr
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('09d8f77065dc14503d306705f164c946ff5c83caececcc437b4f96d6a65a8b03')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: