add r-sepira

2 files changed, 52 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..4500fff9f33a
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,18 @@
+pkgbase = r-sepira
+	pkgdesc = Systems EPigenomics Inference of Regulatory Activity
+	pkgver = 1.16.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/SEPIRA
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-corpcor
+	depends = r-limma
+	optdepends = r-igraph
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/SEPIRA_1.16.0.tar.gz
+	sha256sums = ff360de7089e85531151ee992134e4f8c9bb148eec5da19f982abdbf3768e737
+
+pkgname = r-sepira
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..d3328cf241f7
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,34 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=SEPIRA
+_pkgver=1.16.0
+pkgname=r-${_pkgname,,}
+pkgver=1.16.0
+pkgrel=1
+pkgdesc='Systems EPigenomics Inference of Regulatory Activity'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-corpcor
+  r-limma
+)
+optdepends=(
+  r-igraph
+  r-knitr
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('ff360de7089e85531151ee992134e4f8c9bb148eec5da19f982abdbf3768e737')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: