add r-seqgate

2 files changed, 58 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..e39655d2a327
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,21 @@
+pkgbase = r-seqgate
+	pkgdesc = Filtering of Lowly Expressed Features
+	pkgver = 1.6.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/SeqGate
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-biocmanager
+	depends = r-genomicranges
+	depends = r-s4vectors
+	depends = r-summarizedexperiment
+	optdepends = r-biocstyle
+	optdepends = r-edger
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/SeqGate_1.6.0.tar.gz
+	sha256sums = 93a771ac89af4b6b86c1956ae2c1da4bb25b8540f3cd78c8013d3463dcd54539
+
+pkgname = r-seqgate
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..38314c111771
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,37 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=SeqGate
+_pkgver=1.6.0
+pkgname=r-${_pkgname,,}
+pkgver=1.6.0
+pkgrel=1
+pkgdesc='Filtering of Lowly Expressed Features'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biocmanager
+  r-genomicranges
+  r-s4vectors
+  r-summarizedexperiment
+)
+optdepends=(
+  r-biocstyle
+  r-edger
+  r-knitr
+  r-rmarkdown
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('93a771ac89af4b6b86c1956ae2c1da4bb25b8540f3cd78c8013d3463dcd54539')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: