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| author | Sukanka | 2022-06-06 22:59:35 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 22:59:35 +0800 |
| commit | a62efc47200212ea72dbe0e7b5d5e3f89bd4aea6 (patch) | |
| tree | 62b71d829ccd160cbed4f23509f52e07a1dc284b | |
| download | aur-a62efc47200212ea72dbe0e7b5d5e3f89bd4aea6.tar.gz | |
add r-shinymethyl
| -rw-r--r-- | .SRCINFO | 24 | ||||
| -rw-r--r-- | PKGBUILD | 40 |
2 files changed, 64 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..88ec98bc0434 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,24 @@ +pkgbase = r-shinymethyl + pkgdesc = Interactive visualization for Illumina methylation arrays + pkgver = 1.32.0 + pkgrel = 1 + url = https://bioconductor.org/packages/shinyMethyl + arch = any + license = Artistic2.0 + depends = r + depends = r-biocgenerics + depends = r-illuminahumanmethylation450kmanifest + depends = r-matrixstats + depends = r-minfi + depends = r-rcolorbrewer + depends = r-shiny + optdepends = r-biocstyle + optdepends = r-digest + optdepends = r-knitr + optdepends = r-minfidata + optdepends = r-runit + optdepends = r-shinymethyldata + source = https://bioconductor.org/packages/release/bioc/src/contrib/shinyMethyl_1.32.0.tar.gz + sha256sums = deff47a3cb2508b0d54d3963f2aa135e6e52fe3c38fb4b6c2b741493dcf06698 + +pkgname = r-shinymethyl diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..2664341149b6 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,40 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=shinyMethyl +_pkgver=1.32.0 +pkgname=r-${_pkgname,,} +pkgver=1.32.0 +pkgrel=1 +pkgdesc='Interactive visualization for Illumina methylation arrays' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('Artistic2.0') +depends=( + r + r-biocgenerics + r-illuminahumanmethylation450kmanifest + r-matrixstats + r-minfi + r-rcolorbrewer + r-shiny +) +optdepends=( + r-biocstyle + r-digest + r-knitr + r-minfidata + r-runit + r-shinymethyldata +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('deff47a3cb2508b0d54d3963f2aa135e6e52fe3c38fb4b6c2b741493dcf06698') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |