diff options
| author | Sukanka | 2022-06-06 23:03:31 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 23:03:31 +0800 |
| commit | 5beeaef1bfe003881fee86eada4edbe710781867 (patch) | |
| tree | 16fa5c49881c9652297c89a9099d0e871b18c235 | |
| download | aur-r-sift.hsapiens.dbsnp137.tar.gz | |
add r-sift.hsapiens.dbsnp137
| -rw-r--r-- | .SRCINFO | 15 | ||||
| -rw-r--r-- | PKGBUILD | 29 |
2 files changed, 44 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..c0d1fa77c1a3 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,15 @@ +pkgbase = r-sift.hsapiens.dbsnp137 + pkgdesc = PROVEAN/SIFT Predictions for Homo sapiens dbSNP build 137 + pkgver = 1.0.0 + pkgrel = 3 + url = https://bioconductor.org/packages/SIFT.Hsapiens.dbSNP137 + arch = any + license = Artistic2.0 + depends = r + depends = r-annotationdbi + depends = r-rsqlite + depends = r-variantannotation + source = https://bioconductor.org/packages/release/data/annotation/src/contrib/SIFT.Hsapiens.dbSNP137_1.0.0.tar.gz + sha256sums = 48d25a7afcd0107dde7bb57a946ce068b2f3e0efa1a06cbd8f9f2fabf052e290 + +pkgname = r-sift.hsapiens.dbsnp137 diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..c02451e4989a --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,29 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=SIFT.Hsapiens.dbSNP137 +_pkgver=1.0.0 +pkgname=r-${_pkgname,,} +pkgver=1.0.0 +pkgrel=3 +pkgdesc='PROVEAN/SIFT Predictions for Homo sapiens dbSNP build 137' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('Artistic2.0') +depends=( + r + r-annotationdbi + r-rsqlite + r-variantannotation +) +source=("https://bioconductor.org/packages/release/data/annotation/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('48d25a7afcd0107dde7bb57a946ce068b2f3e0efa1a06cbd8f9f2fabf052e290') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |