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| author | Sukanka | 2022-06-06 23:20:24 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 23:20:24 +0800 |
| commit | eb08f3fe6bd1f0be822d47ac6eec1b0867522aec (patch) | |
| tree | 34f41d9e616bbc8f270a3ec2da51a512ef9663d1 | |
| download | aur-eb08f3fe6bd1f0be822d47ac6eec1b0867522aec.tar.gz | |
add r-slalom
| -rw-r--r-- | .SRCINFO | 26 | ||||
| -rw-r--r-- | PKGBUILD | 42 |
2 files changed, 68 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..a5141c65a11e --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,26 @@ +pkgbase = r-slalom + pkgdesc = Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data + pkgver = 1.18.0 + pkgrel = 1 + url = https://bioconductor.org/packages/slalom + arch = x86_64 + license = GPL + depends = r + depends = r-bh + depends = r-ggplot2 + depends = r-gseabase + depends = r-rcpp + depends = r-rcpparmadillo + depends = r-rsvd + depends = r-singlecellexperiment + depends = r-summarizedexperiment + optdepends = r-biocstyle + optdepends = r-knitr + optdepends = r-rhdf5 + optdepends = r-rmarkdown + optdepends = r-scater + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/slalom_1.18.0.tar.gz + sha256sums = c9786dd351795108482c2dc9183ecd184132a9fe1e70f2a822a4cad4083cde13 + +pkgname = r-slalom diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..29f07ad16670 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,42 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=slalom +_pkgver=1.18.0 +pkgname=r-${_pkgname,,} +pkgver=1.18.0 +pkgrel=1 +pkgdesc='Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data' +arch=('x86_64') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-bh + r-ggplot2 + r-gseabase + r-rcpp + r-rcpparmadillo + r-rsvd + r-singlecellexperiment + r-summarizedexperiment +) +optdepends=( + r-biocstyle + r-knitr + r-rhdf5 + r-rmarkdown + r-scater + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('c9786dd351795108482c2dc9183ecd184132a9fe1e70f2a822a4cad4083cde13') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |