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| author | Sukanka | 2022-06-06 23:31:59 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 23:31:59 +0800 |
| commit | 2d127dccaccb8c0bf5731e991080ca8297ca8dcb (patch) | |
| tree | 76890dd3517a37a63e1a2d16a52acbad34846440 | |
| download | aur-2d127dccaccb8c0bf5731e991080ca8297ca8dcb.tar.gz | |
add r-snapcount
| -rw-r--r-- | .SRCINFO | 33 | ||||
| -rw-r--r-- | PKGBUILD | 50 |
2 files changed, 83 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..118132420276 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,33 @@ +pkgbase = r-snapcount + pkgdesc = R/Bioconductor Package for interfacing with Snaptron for rapid querying of expression counts + pkgver = 1.8.0 + pkgrel = 1 + url = https://bioconductor.org/packages/snapcount + arch = any + license = MIT + depends = r + depends = r-assertthat + depends = r-data.table + depends = r-genomicranges + depends = r-httr + depends = r-iranges + depends = r-jsonlite + depends = r-magrittr + depends = r-purrr + depends = r-r6 + depends = r-rlang + depends = r-stringr + depends = r-summarizedexperiment + optdepends = r-biocmanager + optdepends = r-biocstyle + optdepends = r-bit64 + optdepends = r-covr + optdepends = r-devtools + optdepends = r-knitcitations + optdepends = r-knitr + optdepends = r-rmarkdown + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/snapcount_1.8.0.tar.gz + sha256sums = cab20a756a8bcc2f73c2719370f4c5d0b8a74c89cfabe2ae872ed0cfb7820736 + +pkgname = r-snapcount diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..3a785c02c88f --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,50 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=snapcount +_pkgver=1.8.0 +pkgname=r-${_pkgname,,} +pkgver=1.8.0 +pkgrel=1 +pkgdesc='R/Bioconductor Package for interfacing with Snaptron for rapid querying of expression counts' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('MIT') +depends=( + r + r-assertthat + r-data.table + r-genomicranges + r-httr + r-iranges + r-jsonlite + r-magrittr + r-purrr + r-r6 + r-rlang + r-stringr + r-summarizedexperiment +) +optdepends=( + r-biocmanager + r-biocstyle + r-bit64 + r-covr + r-devtools + r-knitcitations + r-knitr + r-rmarkdown + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('cab20a756a8bcc2f73c2719370f4c5d0b8a74c89cfabe2ae872ed0cfb7820736') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" +} +# vim:set ts=2 sw=2 et: |