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authorViktor Drobot2020-04-28 20:52:37 +0300
committerViktor Drobot2020-04-28 20:52:37 +0300
commit53dc40f12bde8c99b37c3298f7cf05d3aa7cc14d (patch)
treeae94ac851649bd756545cde752b4362643dbb0e6
parent9124911b1ce67ad09dd4d2daa0ecc025b6e69fe3 (diff)
downloadaur-53dc40f12bde8c99b37c3298f7cf05d3aa7cc14d.tar.gz
Update 1.17.5
-rw-r--r--.SRCINFO10
-rw-r--r--PKGBUILD6
2 files changed, 8 insertions, 8 deletions
diff --git a/.SRCINFO b/.SRCINFO
index c5bd5dba253f..67701fda70b0 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = r-summarizedexperiment
pkgdesc = SummarizedExperiment container
- pkgver = 1.16.1
+ pkgver = 1.17.5
pkgrel = 1
url = https://bioconductor.org/packages/release/bioc/html/SummarizedExperiment.html
arch = any
@@ -10,8 +10,8 @@ pkgbase = r-summarizedexperiment
depends = r-biobase
depends = r-delayedarray>=0.3.20
depends = r-biocgenerics>=0.15.3
- depends = r-s4vectors>=0.23.20
- depends = r-iranges>=2.13.16
+ depends = r-s4vectors>=0.25.14
+ depends = r-iranges>=2.21.6
depends = r-genomeinfodb>=1.13.1
optdepends = r-annotate
optdepends = r-annotationdbi
@@ -28,8 +28,8 @@ pkgbase = r-summarizedexperiment
optdepends = r-airway
optdepends = r-runit
optdepends = r-testthat
- source = https://bioconductor.org/packages/release/bioc/src/contrib/SummarizedExperiment_1.16.1.tar.gz
- md5sums = 33fbb7b4c9bad189ecfa7b0e3830d0d9
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/SummarizedExperiment_1.17.5.tar.gz
+ md5sums = cbb988dfff5bd1ce6b046d1183cac09c
pkgname = r-summarizedexperiment
diff --git a/PKGBUILD b/PKGBUILD
index 7ee5fdb7b118..095ba474d12d 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,7 +2,7 @@
# Contributor: Grey Christoforo <first name at last name dot net>
_bcname=SummarizedExperiment
-_bcver=1.16.1
+_bcver=1.17.5
pkgname=r-${_bcname,,}
pkgver=${_bcver//[:-]/.}
pkgrel=1
@@ -10,10 +10,10 @@ pkgdesc="SummarizedExperiment container"
arch=(any)
url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
license=(Artistic-2.0)
-depends=('r>=3.2' 'r-genomicranges>=1.33.6' r-biobase 'r-delayedarray>=0.3.20' 'r-biocgenerics>=0.15.3' 'r-s4vectors>=0.23.20' 'r-iranges>=2.13.16' 'r-genomeinfodb>=1.13.1')
+depends=('r>=3.2' 'r-genomicranges>=1.33.6' r-biobase 'r-delayedarray>=0.3.20' 'r-biocgenerics>=0.15.3' 'r-s4vectors>=0.25.14' 'r-iranges>=2.21.6' 'r-genomeinfodb>=1.13.1')
optdepends=(r-annotate r-annotationdbi r-hgu95av2.db r-genomicfeatures r-txdb.hsapiens.ucsc.hg19.knowngene r-biocstyle r-knitr r-rmarkdown r-digest r-jsonlite r-rhdf5 r-hdf5array r-airway r-runit r-testthat)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
-md5sums=('33fbb7b4c9bad189ecfa7b0e3830d0d9')
+md5sums=('cbb988dfff5bd1ce6b046d1183cac09c')
build() {
cd "${srcdir}"