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| author | Sukanka | 2022-06-07 00:58:38 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-07 00:58:38 +0800 |
| commit | 491b6b51846fcf41d0fe97548b03563e39956976 (patch) | |
| tree | 6b38b742760b98f591cb102690dd44973e3b0928 | |
| download | aur-491b6b51846fcf41d0fe97548b03563e39956976.tar.gz | |
add r-summix
| -rw-r--r-- | .SRCINFO | 16 | ||||
| -rw-r--r-- | PKGBUILD | 33 |
2 files changed, 49 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..dde1fe3f2afe --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,16 @@ +pkgbase = r-summix + pkgdesc = Summix: A method to estimate and adjust for population structure in genetic summary data + pkgver = 2.2.0 + pkgrel = 1 + url = https://bioconductor.org/packages/Summix + arch = any + license = MIT + depends = r + depends = r-nloptr + optdepends = r-knitr + optdepends = r-markdown + optdepends = r-rmarkdown + source = https://bioconductor.org/packages/release/bioc/src/contrib/Summix_2.2.0.tar.gz + sha256sums = 8b436a78ba35b23c72b577a7db93b2c1f66e7462eee5534b69b38968476ec721 + +pkgname = r-summix diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..979b0cad735a --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,33 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=Summix +_pkgver=2.2.0 +pkgname=r-${_pkgname,,} +pkgver=2.2.0 +pkgrel=1 +pkgdesc='Summix: A method to estimate and adjust for population structure in genetic summary data' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('MIT') +depends=( + r + r-nloptr +) +optdepends=( + r-knitr + r-markdown + r-rmarkdown +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('8b436a78ba35b23c72b577a7db93b2c1f66e7462eee5534b69b38968476ec721') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" +} +# vim:set ts=2 sw=2 et: |