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| author | Sukanka | 2022-06-07 01:01:14 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-07 01:01:14 +0800 |
| commit | b39547ea892da1499a9f99b40a63ef4e09ceb68a (patch) | |
| tree | d8f5b534a2f51a6a1116d2b499b6a54b0d34266b | |
| download | aur-b39547ea892da1499a9f99b40a63ef4e09ceb68a.tar.gz | |
add r-surfaltr
| -rw-r--r-- | .SRCINFO | 28 | ||||
| -rw-r--r-- | PKGBUILD | 45 |
2 files changed, 73 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..8deeaeb6295f --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,28 @@ +pkgbase = r-surfaltr + pkgdesc = Rapid Comparison of Surface Protein Isoform Membrane Topologies Through surfaltr + pkgver = 1.2.1 + pkgrel = 1 + url = https://bioconductor.org/packages/surfaltr + arch = any + license = MIT + depends = r + depends = r-biomart + depends = r-biostrings + depends = r-dplyr + depends = r-ggplot2 + depends = r-httr + depends = r-msa + depends = r-protr + depends = r-readr + depends = r-seqinr + depends = r-stringr + depends = r-testthat + depends = r-xml2 + optdepends = r-devtools + optdepends = r-kableextra + optdepends = r-knitr + optdepends = r-rmarkdown + source = https://bioconductor.org/packages/release/bioc/src/contrib/surfaltr_1.2.1.tar.gz + sha256sums = f0b9635cf78de08bfaf20d44e7e36b4ea2e5aba583b3c0357c7553f132c0d9cc + +pkgname = r-surfaltr diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..8c27bcbecadb --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,45 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=surfaltr +_pkgver=1.2.1 +pkgname=r-${_pkgname,,} +pkgver=1.2.1 +pkgrel=1 +pkgdesc='Rapid Comparison of Surface Protein Isoform Membrane Topologies Through surfaltr' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('MIT') +depends=( + r + r-biomart + r-biostrings + r-dplyr + r-ggplot2 + r-httr + r-msa + r-protr + r-readr + r-seqinr + r-stringr + r-testthat + r-xml2 +) +optdepends=( + r-devtools + r-kableextra + r-knitr + r-rmarkdown +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('f0b9635cf78de08bfaf20d44e7e36b4ea2e5aba583b3c0357c7553f132c0d9cc') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" +} +# vim:set ts=2 sw=2 et: |