add r-synergyfinder

2 files changed, 90 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..151588e4b034
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,37 @@
+pkgbase = r-synergyfinder
+	pkgdesc = Calculate and Visualize Synergy Scores for Drug Combinations
+	pkgver = 3.4.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/synergyfinder
+	arch = any
+	license = MPL2
+	depends = r
+	depends = r-dplyr
+	depends = r-drc
+	depends = r-furrr
+	depends = r-future
+	depends = r-ggforce
+	depends = r-ggplot2
+	depends = r-ggrepel
+	depends = r-gstat
+	depends = r-kriging
+	depends = r-magrittr
+	depends = r-metr
+	depends = r-mice
+	depends = r-nleqslv
+	depends = r-pbapply
+	depends = r-plotly
+	depends = r-purrr
+	depends = r-reshape2
+	depends = r-sp
+	depends = r-spatialextremes
+	depends = r-stringr
+	depends = r-tidyr
+	depends = r-tidyverse
+	depends = r-vegan
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/synergyfinder_3.4.0.tar.gz
+	sha256sums = 28df61b8211afc0d653d5aee1b2b2980deb096e391b53f549f707c3dce7ee5a3
+
+pkgname = r-synergyfinder
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..736d61e26826
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,53 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=synergyfinder
+_pkgver=3.4.0
+pkgname=r-${_pkgname,,}
+pkgver=3.4.0
+pkgrel=1
+pkgdesc='Calculate and Visualize Synergy Scores for Drug Combinations'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('MPL2')
+depends=(
+  r
+  r-dplyr
+  r-drc
+  r-furrr
+  r-future
+  r-ggforce
+  r-ggplot2
+  r-ggrepel
+  r-gstat
+  r-kriging
+  r-magrittr
+  r-metr
+  r-mice
+  r-nleqslv
+  r-pbapply
+  r-plotly
+  r-purrr
+  r-reshape2
+  r-sp
+  r-spatialextremes
+  r-stringr
+  r-tidyr
+  r-tidyverse
+  r-vegan
+)
+optdepends=(
+  r-knitr
+  r-rmarkdown
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('28df61b8211afc0d653d5aee1b2b2980deb096e391b53f549f707c3dce7ee5a3')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: