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authorBioArchLinuxBot2022-11-26 16:40:19 +0000
committerBioArchLinuxBot2022-11-26 16:40:19 +0000
commit9e184a4e5d93affc44c48bdb04fa8412c63313f8 (patch)
tree86aac87e2f2f847fb302664bbf303c2865a2732f
parentef18da66d821f6949e82f836a5ce3592cdcad4d2 (diff)
downloadaur-9e184a4e5d93affc44c48bdb04fa8412c63313f8.tar.gz
[lilac] updated to 2.25.3-3
-rw-r--r--.SRCINFO5
-rw-r--r--PKGBUILD5
2 files changed, 8 insertions, 2 deletions
diff --git a/.SRCINFO b/.SRCINFO
index e1995efa5d1c..ad6a99aae569 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,7 +1,7 @@
pkgbase = r-tcgabiolinks
pkgdesc = TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data
pkgver = 2.25.3
- pkgrel = 1
+ pkgrel = 3
url = https://bioconductor.org/packages/TCGAbiolinks
arch = any
license = GPL
@@ -30,6 +30,7 @@ pkgbase = r-tcgabiolinks
depends = r-xml
depends = r-xml2
optdepends = r-affy
+ optdepends = r-annotationhub
optdepends = r-biobase
optdepends = r-biocstyle
optdepends = r-c3net
@@ -42,6 +43,7 @@ pkgbase = r-tcgabiolinks
optdepends = r-doparallel
optdepends = r-edaseq
optdepends = r-edger
+ optdepends = r-experimenthub
optdepends = r-genefilter
optdepends = r-ggrepel
optdepends = r-grid
@@ -58,6 +60,7 @@ pkgbase = r-tcgabiolinks
optdepends = r-rmarkdown
optdepends = r-scales
optdepends = r-sesame
+ optdepends = r-seurat
optdepends = r-suprahex
optdepends = r-survival
optdepends = r-survminer
diff --git a/PKGBUILD b/PKGBUILD
index 628ad179d35e..b2fb823bed69 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -4,7 +4,7 @@ _pkgname=TCGAbiolinks
_pkgver=2.25.3
pkgname=r-${_pkgname,,}
pkgver=2.25.3
-pkgrel=1
+pkgrel=3
pkgdesc='TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
@@ -37,6 +37,7 @@ depends=(
)
optdepends=(
r-affy
+ r-annotationhub
r-biobase
r-biocstyle
r-c3net
@@ -49,6 +50,7 @@ optdepends=(
r-doparallel
r-edaseq
r-edger
+ r-experimenthub
r-genefilter
r-ggrepel
r-grid
@@ -65,6 +67,7 @@ optdepends=(
r-rmarkdown
r-scales
r-sesame
+ r-seurat
r-suprahex
r-survival
r-survminer