add r-tin

2 files changed, 62 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..5361e3c680e2
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,23 @@
+pkgbase = r-tin
+	pkgdesc = Transcriptome instability analysis
+	pkgver = 1.28.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/TIN
+	arch = any
+	license = Artistic2.0
+	depends = r
+	depends = r-aroma.affymetrix
+	depends = r-data.table
+	depends = r-impute
+	depends = r-squash
+	depends = r-stringr
+	depends = r-wgcna
+	optdepends = r-affxparser
+	optdepends = r-aroma.light
+	optdepends = r-biocgenerics
+	optdepends = r-knitr
+	optdepends = r-runit
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/TIN_1.28.0.tar.gz
+	sha256sums = 96bc9b27e344939ae3e9d9661d880a1e3c486b38c934f869afcd15175b21facd
+
+pkgname = r-tin
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..94082c1fdb01
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,39 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=TIN
+_pkgver=1.28.0
+pkgname=r-${_pkgname,,}
+pkgver=1.28.0
+pkgrel=1
+pkgdesc='Transcriptome instability analysis'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-aroma.affymetrix
+  r-data.table
+  r-impute
+  r-squash
+  r-stringr
+  r-wgcna
+)
+optdepends=(
+  r-affxparser
+  r-aroma.light
+  r-biocgenerics
+  r-knitr
+  r-runit
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('96bc9b27e344939ae3e9d9661d880a1e3c486b38c934f869afcd15175b21facd')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: