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author | Sukanka | 2022-06-07 01:52:00 +0800 |
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committer | Sukanka | 2022-06-07 01:52:00 +0800 |
commit | debe7d90499d1598a7bf9b164993bf89b97486ef (patch) | |
tree | 1e5ffa4069fa9e351b0846634e432e70c5b7375d | |
download | aur-debe7d90499d1598a7bf9b164993bf89b97486ef.tar.gz |
add r-tracktables
-rw-r--r-- | .SRCINFO | 22 | ||||
-rw-r--r-- | PKGBUILD | 38 |
2 files changed, 60 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..e093b4905c2d --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,22 @@ +pkgbase = r-tracktables + pkgdesc = Build IGV tracks and HTML reports + pkgver = 1.30.0 + pkgrel = 1 + url = https://bioconductor.org/packages/tracktables + arch = any + license = GPL + depends = r + depends = r-genomicranges + depends = r-iranges + depends = r-rcolorbrewer + depends = r-rsamtools + depends = r-stringr + depends = r-tractor.base + depends = r-xml + depends = r-xvector + optdepends = r-biocstyle + optdepends = r-knitr + source = https://bioconductor.org/packages/release/bioc/src/contrib/tracktables_1.30.0.tar.gz + sha256sums = 20d069b120bfe05ed06f32d836999ad8b164b08455d82966034153be15b26477 + +pkgname = r-tracktables diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..47240ee2debc --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,38 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=tracktables +_pkgver=1.30.0 +pkgname=r-${_pkgname,,} +pkgver=1.30.0 +pkgrel=1 +pkgdesc='Build IGV tracks and HTML reports' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-genomicranges + r-iranges + r-rcolorbrewer + r-rsamtools + r-stringr + r-tractor.base + r-xml + r-xvector +) +optdepends=( + r-biocstyle + r-knitr +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('20d069b120bfe05ed06f32d836999ad8b164b08455d82966034153be15b26477') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |