add r-transview

2 files changed, 61 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..be0fe6df3919
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,22 @@
+pkgbase = r-transview
+	pkgdesc = Read density map construction and accession. Visualization of ChIPSeq and RNASeq data sets
+	pkgver = 1.40.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/TransView
+	arch = x86_64
+	license = GPL
+	depends = r
+	depends = r-biocgenerics
+	depends = r-genomicranges
+	depends = r-gplots
+	depends = r-iranges
+	depends = r-rhtslib
+	depends = r-s4vectors
+	depends = r-zlibbioc
+	optdepends = r-biocmanager
+	optdepends = r-pasillabamsubset
+	optdepends = r-runit
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/TransView_1.40.0.tar.gz
+	sha256sums = 8ee47ec6b52f9ef36dad623776ac7c334a60dcbb164313cfada20ad839d06ecc
+
+pkgname = r-transview
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..7714c3c7b92b
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,39 @@
+# system requirements: GNU make
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=TransView
+_pkgver=1.40.0
+pkgname=r-${_pkgname,,}
+pkgver=1.40.0
+pkgrel=1
+pkgdesc='Read density map construction and accession. Visualization of ChIPSeq and RNASeq data sets'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biocgenerics
+  r-genomicranges
+  r-gplots
+  r-iranges
+  r-rhtslib
+  r-s4vectors
+  r-zlibbioc
+)
+optdepends=(
+  r-biocmanager
+  r-pasillabamsubset
+  r-runit
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('8ee47ec6b52f9ef36dad623776ac7c334a60dcbb164313cfada20ad839d06ecc')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: