add r-traviz

2 files changed, 73 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..4bc312288b9a
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,28 @@
+pkgbase = r-traviz
+	pkgdesc = Trajectory functions for visualization and interpretation.
+	pkgver = 1.2.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/traviz
+	arch = any
+	license = MIT
+	depends = r
+	depends = r-biobase
+	depends = r-ggplot2
+	depends = r-princurve
+	depends = r-rcolorbrewer
+	depends = r-rgl
+	depends = r-singlecellexperiment
+	depends = r-slingshot
+	depends = r-summarizedexperiment
+	depends = r-viridis
+	optdepends = r-covr
+	optdepends = r-dplyr
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-s4vectors
+	optdepends = r-scater
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/traviz_1.2.0.tar.gz
+	sha256sums = 5ebdf644b74451583d754fb5fa6608b3d55f075593d2b0315a3e547be6644ff8
+
+pkgname = r-traviz
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..fbc64b2eebce
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,45 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=traviz
+_pkgver=1.2.0
+pkgname=r-${_pkgname,,}
+pkgver=1.2.0
+pkgrel=1
+pkgdesc='Trajectory functions for visualization and interpretation.'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('MIT')
+depends=(
+  r
+  r-biobase
+  r-ggplot2
+  r-princurve
+  r-rcolorbrewer
+  r-rgl
+  r-singlecellexperiment
+  r-slingshot
+  r-summarizedexperiment
+  r-viridis
+)
+optdepends=(
+  r-covr
+  r-dplyr
+  r-knitr
+  r-rmarkdown
+  r-s4vectors
+  r-scater
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('5ebdf644b74451583d754fb5fa6608b3d55f075593d2b0315a3e547be6644ff8')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+#  install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
+}
+# vim:set ts=2 sw=2 et: